Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq188 293 3e-74 seq290 185 1e-41 seq143 134 2e-26 seq273 93.3 5e-14 >seq188 Length=237477 Score = 293 bits (324), Expect = 3e-74 Identities = 704/1053 (67%), Gaps = 33/1053 (3%) Strand=Plus/Minus Query 80725 TCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCC 80784 |||||||| || || || || || | || || |||||||| ||| || ||| Sbjct 168175 TCAGCCAGACCTTGCACACCCATACCAATGGGTCGGTGGCGGAAGTTGCTGCGGCGCGCC 168116 Query 80785 TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT 80844 ||| | ||||| ||| ||| |||| ||||| |||||| || |||||| | Sbjct 168115 TCCTCGACGGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTGCGAGTGACAACCTGG 168056 Query 80845 GTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTC------ACAAATGCCGGA 80898 || || || || || |||| ||||| || | | ||| ||||| | || Sbjct 168055 GTGACCTCGTGGAGCTTCTTGAAGTCAAACTCTCCGCGCTTGTAGTCGACAAAGGAAGGC 167996 Query 80899 AGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATT 80958 ||| ||||| |||| ||||| || || ||||| |||| | || |||||| ||| Sbjct 167995 AGGGCAAGGGAGGCCAAGTTGCAGACAGCGACCTCGTCAGGGGCAGTGTACTCGATAATT 167936 Query 80959 TCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTG 81018 |||||||||| || || ||| ||||||||||| |||||||| |||| |||| Sbjct 167935 TCCGTGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTG 167876 Query 81019 CAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCG 81078 ||||| ||||||||| |||| | || |||| |||||| ||| | || ||| ||||| Sbjct 167875 CAAGCATCCTTGTAGAGCATGAAGGGATTACCAGTCTCGGTCTGGGCCTCGAGAATGGCA 167816 Query 81079 TCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGC--CACATACTTGG 81136 | ||| | || | || ||| || ||| ||| ||| || | | || | Sbjct 167815 TACCACAGCTTCTGGGCGCGGACAGTCTCACGGCCCTTG--TTCTGCTTCTCGTAGCTCT 167758 Query 81137 CGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGG 81195 |||| ||| | || |||| | |||| | |||| ||| | ||||||||||| ||| Sbjct 167757 CGTACAGCGCC-TCAAACTCCTCGCCGTAGACATCAGCCAGGCCAGGGCACTCGTTGGGG 167699 Query 81196 CACATCAGGTGCCAGTCGGTGTCGTTCTCT---ACAGCCTTCATGAAAGCGTCAGGGATC 81252 ||||| || ||| ||| |||||||| ||| ||||||||| || || ||| Sbjct 167698 CACATGAGAGTCCACTCGC---CGTTCTCTTGGACACGCTTCATGAACAGATCGGGAATC 167642 Query 81253 CAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAAC 81312 || || ||| ||| || || ||| ||| ||||||| | || ||||| ||| | Sbjct 167641 CACAGAGCGTAGAAGAGATCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGG 167582 Query 81313 TCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTG 81372 ||||| ||| | | |||||| || ||||||||||| || || | ||| | | || || Sbjct 167581 TCGAGGAAGCCAAAGATGTCAGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACC--TG 167524 Query 81373 CGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATA 81426 |||| ||||||||||| ||||||||| ||||| || ||||||| | |||| Sbjct 167523 -GACGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGTTATTGTATACACGGAGCATA 167465 Query 81427 GGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA-- 81484 ||||| | ||| | ||| ||||| || || | || || || |||| || | Sbjct 167464 GGGATAAGACCGTTTGATGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATT 167405 Query 81485 CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCA 81544 | ||| |||| |||| || || || | ||| || ||| |||||| || | Sbjct 167404 CGGTGCACGTTGA--GACCAATACCGCCAGCGGTCTTGGAGATCAAGGCACACGTCTTGA 167347 Query 81545 TGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACA 81604 || || || || || || |||||||| | ||||||||| | | ||| ||| |||| Sbjct 167346 GAGTGTCGTAGATGCCGTCAATGCTATCCTCTTTCATGTCGATAAGGAAGCAGGAGGACA 167287 Query 81605 TCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGT 81664 |||||||| | | |||||||||||||| || || | ||||| |||| || | Sbjct 167286 TCTGAGGGGATGGAGTACCGGCATTGAACAGCGTCGGTGAGGCGTGTGTGAAGTATTTTT 167227 Query 81665 TTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAG 81724 |||||| ||||||||| || || | ||| || || ||||| ||||||| || Sbjct 167226 GTGACATGTAGTCATAGGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATACCGACAG 167167 Query 81725 CTACACGCATAAACATGTACTG-GGGCGTCTCG 81756 | |||||||| | ||||| ||| ||||| |||| Sbjct 167166 CAACACGCATGAGCATGTGCTGTGGGCG-CTCG 167135 Score = 89.7 bits (98), Expect = 6e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || |||||||||||||| |||||||| || |||||| ||| | |||||| || Sbjct 168868 GTACGGAGATAGTACATGCCTGTCTTGAGACCAAGCTTCCATCCGGCAAAGTGCATGGAG 168809 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | ||||| | || |||| |||||| || ||||| ||||| ||| Sbjct 168808 GTGATCTTGCCCATGGTGGGCTCCTTCATGTGGATGTTGAGTGACTGGGACTGGTCAATG 168749 Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAAT 80189 || || ||||| || || ||||| | ||||| Sbjct 168748 AAGGCACCACGGTCGGCAGCCATCTGGATAAT 168717 >seq290 Length=256071 Score = 185 bits (204), Expect = 1e-41 Identities = 179/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| |||||||||||||| || || | ||||| || || | Sbjct 202923 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACAATCACATTGGAGGTGGAATCGAGC 202982 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || ||||| | || || |||||||||||||| || ||||| |||||| Sbjct 202983 GATACCATTGACAACGTGAAGACCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 203042 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||||||||||||||||||||||| | || || | ||||| || Sbjct 203043 CAGCGTCTCATCTTTGCTGGTAAGCAACTCGAGGATGGCAGGACGCTCTCGGACTACAAC 203102 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||| || || | || | |||||||| || || || Sbjct 203103 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTTCGTGGCGGTCA 203152 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || || ||||| || ||||||||||| ||||| Sbjct 202695 ATGCAGATCTTCGTCAAGACATTGACTGGAAAGACCATCACTCTTGAGGTCGAGTCTTCG 202754 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||||| || || || ||||||||||| || || ||||||||| Sbjct 202755 GATACTATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 202814 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| ||||||||||| | || || | ||||| || | ||||| || Sbjct 202815 CAGCGTCTCATTTTCGCTGGTAAGCAGTTGGAAGACGGCCGTACTCTCTCGGACTACAAC 202874 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || |||||||| | || | ||||| || ||||| Sbjct 202875 ATCCAGAAGGAGTCAACTCTTCACTTGGTGCTCCGTCTGCGTGGTGG 202921 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || |||||||||||| || | || | || | ||| | Sbjct 202491 ACCGGCAAGACCATCACACTCGAGGTTGAGTCATCCGACACGATCGACAACGTCAAGACA 202550 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| |||||||||||||||||||| || ||||| || || ||| Sbjct 202551 AAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGCGCCTGATTTTCGCCGGCAAG 202610 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||||| || || || | ||||| || | || ||||| || ||||| ||| Sbjct 202611 CAGCTCGAGGATGGCCGCACTCTGTCCGACTACAACATTCAGAAGGAGTCTACTCTGCAT 202670 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || ||||| Sbjct 202671 CTCGTCCTCCGCCTCCGTGGTGG 202693 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||| ||||| || | || | ||| | ||| | Sbjct 202208 ACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGACACTATCGACAATGTCAAGACC 202267 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| ||||| |||||||||||||| | || ||||| || ||| Sbjct 202268 AAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGCTTGATCTTTGCCGGCAAG 202327 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || || || | ||| ||||| | ||||| || | |||||||||||||| || || Sbjct 202328 CAGCTTGAAGACGGTCGCACCCTGTCCGACTACAACATTCAAAAGGAATCCACCCTCCAC 202387 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || ||||| Sbjct 202388 CTGGTCCTCCGCCTCCGTGGTGG 202410 >seq143 Length=90640 Score = 134 bits (148), Expect = 2e-26 Identities = 119/149 (80%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||| | || || |||||||||||||| ||||| || |||||||||||||| || || ||| Sbjct 42982 AAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCT 43041 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || ||||| |||||||||| ||| ||||| | ||||| || |||| ||||| || || Sbjct 43042 GGAAAGCAGCTCGAGGATGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACA 43101 Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || ||| | ||||| || ||||| Sbjct 43102 CTTCACCTCGTCCTCCGTCTCCGTGGTGG 43130 >seq273 Length=368666 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| ||||| || |||||||||||||| || || || || ||||| || ||| Sbjct 357240 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAG 357181 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | ||||| || |||| ||||| || || || || | ||| | Sbjct 357180 GATGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCTC 357121 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 357120 CGCCTGCGTGGTGG 357107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570307733798880