Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq290 154 3e-32
seq188 123 6e-23
seq143 118 2e-21
seq273 89.7 1e-12
>seq290
Length=256071
Score = 154 bits (170), Expect = 3e-32
Identities = 148/190 (78%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || || ||||| ||||| || || ||||| || || | || || | |||||
Sbjct 202678 AGGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCC 202619
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || ||||| || ||||| ||||||| || |||||||||
Sbjct 202618 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCC 202559
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| || ||||| ||||| ||||| || ||||||||||| ||||| |||
Sbjct 202558 TGGATCTTTGTCTTGACGTTGTCGATCGTGTCGGATGACTCAACCTCGAGTGTGATGGTC 202499
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 202498 TTGCCGGTGA 202489
Score = 141 bits (156), Expect = 2e-28
Identities = 167/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||| || |||||||| || |||||||| || |||| || ||
Sbjct 203144 ACGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGT 203085
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| ||||| || || ||||| || || ||||| || || || ||||| ||||| | ||
Sbjct 203084 CCTGCCATCCTCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACC 203025
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTC 211069
||||||||||||||||| |||||||| || ||||| || ||| ||| |||||
Sbjct 203024 CTCCTTGTCCTGGATCTTGGTCTTCACGTTGTCAATGGTATC---GCTCGATTCCACCTC 202968
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
| ||||| ||||| || || || ||||| || || | |||||
Sbjct 202967 CAATGTGATTGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923
Score = 140 bits (154), Expect = 8e-28
Identities = 145/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || ||||| || ||||| ||||| || || | ||||| | || |||
Sbjct 202395 AGGACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCT 202336
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| | ||| || ||||| || |||| || |||||||||
Sbjct 202335 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 202276
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || ||||| ||||| ||| || |||||||| ||||| |||
Sbjct 202275 TGAATCTTGGTCTTGACATTGTCGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTC 202216
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 202215 TTGCCGGTGA 202206
>seq188
Length=237477
Score = 123 bits (136), Expect = 6e-23
Identities = 198/278 (71%), Gaps = 10/278 (4%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||||||||| | ||||| ||||| ||||| |||||||| ||| |
Sbjct 167900 GTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTAGAGCATGAAGGG-ATTAC 167845
Query 178150 CA-CCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTT 178208
|| ||| | || ||| |||||||| || ||| |||| |||||| ||||||||||
Sbjct 167844 CAGTCTCGGTCTGGGCCTCGAGAATGGCATACCACAGCTTCTGGGCGCGGACAGTCTCAC 167785
Query 178209 TG-GCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACA 178267
| ||| | || | |||||||| | | ||| ||| |||| || ||| || ||||||
Sbjct 167784 GGCCCTTGTTCTGC-TTCTCGTAGCTCTCGTACAGCGCCTCAAACTCCTCGCCGTAGACA 167726
Query 178268 TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACT 178327
||| | || || || ||| |||||||| | |||| |||||| |||| || | ||
Sbjct 167725 TCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGCCGTTCTCTTGGACA 167666
Query 178328 CGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|| |||||||| || || | |||| | || |||||
Sbjct 167665 CGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAA 167628
>seq143
Length=90640
Score = 118 bits (130), Expect = 2e-21
Identities = 103/128 (80%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| || ||||| || |||||||| || || | |||||| | |||||
Sbjct 43115 AGGACGAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCC 43056
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| || || || ||||| || |||| || |||||||||
Sbjct 43055 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 42996
Query 211023 TGGATCTT 211030
||||||||
Sbjct 42995 TGGATCTT 42988
>seq273
Length=368666
Score = 89.7 bits (98), Expect = 1e-12
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| || || ||||| || |||||||| || || | || || | |||||
Sbjct 357122 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCC 357181
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| || || || ||||| || |||| || ||||||||
Sbjct 357182 TCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 357240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159146445488510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |