Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq300 104 6e-17
seq290 104 6e-17
seq220 104 6e-17
seq143 100 7e-16
>seq300
Length=14979
Score = 104 bits (114), Expect = 6e-17
Identities = 177/251 (71%), Gaps = 7/251 (3%)
Strand=Plus/Minus
Query 7465 TTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCG 7524
||| | ||| | || || ||| |||||| | | || || |||||| | | | ||
Sbjct 12271 TTTGCAGGTCTAATTGGAACTGCTTTTTCTGTATTAATTAGATTAGAACTGTCAGGACCA 12212
Query 7525 GGTTCTCAAATATTGAG-TGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGC 7583
||| |||| ||| || || |||| ||| | || ||| ||||||||| || |||||
Sbjct 12211 GGTGTTCAA-TATATAGCTGATAAT---CAATTATATAACAGTATTATTACTGCTCATGC 12156
Query 7584 CTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATT 7643
|| |||||||||||||| | |||||||| | | | || || || ||||| || | ||
Sbjct 12155 TATTATTATGATTTTCTTTATGGTTATGCCAGCTTTAATTGGTGGATTCGGTAACTTTTT 12096
Query 7644 CGTTCCTTTAATGATT-GGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTT 7702
|||| || | |||| || | |||||||||| || || || ||||| ||||||||||
Sbjct 12095 ACTTCCATT-AGGATTAGGAGGACCTGATATGGGATTCCCTAGACTTAATAATATAAGTT 12037
Query 7703 TTTGATTACTA 7713
| |||| ||
Sbjct 12036 ACTTATTATTA 12026
>seq290
Length=256071
Score = 104 bits (114), Expect = 6e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| ||||| || || || |||| ||||| || | | ||| | || |||
Sbjct 202906 AGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGGCCGTCT 202847
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||| |||||||| || || || || ||||| || || || || |||||||||
Sbjct 202846 TCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 202787
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || || || || || || | || || || | ||||| |||
Sbjct 202786 TGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAAGACTCGACCTCAAGAGTGATGGTC 202727
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || || | ||| | |||||
Sbjct 202726 TTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695
>seq220
Length=10208
Score = 104 bits (114), Expect = 6e-17
Identities = 177/251 (71%), Gaps = 7/251 (3%)
Strand=Plus/Minus
Query 7465 TTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCG 7524
||| | ||| | || || ||| |||||| | | || || |||||| | | | ||
Sbjct 6117 TTTGCAGGTCTAATTGGAACTGCTTTTTCTGTATTAATTAGATTAGAACTGTCAGGACCA 6058
Query 7525 GGTTCTCAAATATTGAG-TGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGC 7583
||| |||| ||| || || |||| ||| | || ||| ||||||||| || |||||
Sbjct 6057 GGTGTTCAA-TATATAGCTGATAAT---CAATTATATAACAGTATTATTACTGCTCATGC 6002
Query 7584 CTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATT 7643
|| |||||||||||||| | |||||||| | | | || || || ||||| || | ||
Sbjct 6001 TATTATTATGATTTTCTTTATGGTTATGCCAGCTTTAATTGGTGGATTCGGTAACTTTTT 5942
Query 7644 CGTTCCTTTAATGATT-GGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTT 7702
|||| || | |||| || | |||||||||| || || || ||||| ||||||||||
Sbjct 5941 ACTTCCATT-AGGATTAGGAGGACCTGATATGGGATTCCCTAGACTTAATAATATAAGTT 5883
Query 7703 TTTGATTACTA 7713
| |||| ||
Sbjct 5882 ACTTATTATTA 5872
>seq143
Length=90640
Score = 100 bits (110), Expect = 7e-16
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || || || |||| ||||| |||| | || | |||||
Sbjct 43115 AGGACGAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCC 43056
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || ||||| || ||||| || ||||||||
Sbjct 43055 TCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 42996
Query 225622 TGGATCTT 225629
||||||||
Sbjct 42995 TGGATCTT 42988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192525485539556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |