Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq188 145 1e-29 >seq188 Length=237477 Score = 145 bits (160), Expect = 1e-29 Identities = 410/618 (66%), Gaps = 14/618 (2%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || || || | |||||| ||| ||||| || || || || ||||| | | | Sbjct 167746 TCAAACTCCTCGCCGTAGACATCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTC 167687 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 ||||| || | || | || || ||||| || ||||| || ||||| ||||| || Sbjct 167686 CACTCGCCGTTCTCTTGGACACGCTTCATGAACAGATCGGGAATCCACAGAGCGTAGAAG 167627 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| | | || || || || ||||| || || ||||| | | Sbjct 167626 AGATCACGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAG 167567 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 || |||| |||||||| || || || || || | |||| || || || || || ||| Sbjct 167566 ATGTCAGCGTGCCATGGCTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCC 167507 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | || | ||||||||||| || || | | ||| || |||| ||||| ||| Sbjct 167506 TGGTCGACGTAACGAGCAGTGTTATTGTATACACGGAGCATAGGGATAAGACCGTTTGAT 167447 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT-AGGCC 76878 || || || || || ||| || || ||||| || | | | | || || Sbjct 167446 GTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGAT-TCGGTGCACGTTGAGACC 167388 Query 76879 TATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT-TTCAATGTGTCATAGATGCCCT 76937 || || || || | || ||||| | ||||| ||| || | ||||| |||||||| | Sbjct 167387 AATACCGCCAGCGGTCTTGGAGATCAAGGCACA-CGTCTTGAGAGTGTCGTAGATGCCGT 167329 Query 76938 CTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGA--TGATGAACAGT 76995 | || ||||| || |||||| | ||| || ||| ||||| ||| |||| ||| Sbjct 167328 CAATGCTATCCTCTTTCATGTCGATAAGGAAGCAGGAGGACATCTGAGGGGATG--GAGT 167271 Query 76996 TCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGA-AAGTAGATTGT 77054 || ||||| |||| || || || || || ||||| |||||| || | |||| | | Sbjct 167270 ACCGGCATTGAACAGCGTCGGTGAGGCGTGTGTGAAGTATTTTTGTGACATGTAG-TCAT 167212 Query 77055 ATGTTTCAATAACTGCTTCT--ATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 | || ||||| | ||||| || ||| || || || ||||| |||||||| | Sbjct 167211 AGGTCTCAATGGC--CTTCTCAATGTCCTCGCCGTGGATACCGACAGCAACACGCATGAG 167154 Query 77113 CATATGCTGAGGTCGTTC 77130 ||| ||||| || || || Sbjct 167153 CATGTGCTGTGGGCGCTC 167136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712931067031680