Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq290 159 7e-34 seq273 105 1e-17 seq143 102 2e-16 seq154 87.8 4e-12 >seq290 Length=256071 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| || | || || || |||||||||||||| | Sbjct 202922 ACCACCACGCAGACGGAGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCCGA 202863 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| || || | || || || || || || | ||| || ||||| || Sbjct 202862 GAGAGTACGGCCGTCTTCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTCTGGGGG 202803 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||||||||||||||| || || ||| | || ||||| ||||||| ||||| Sbjct 202802 GATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAAGACTCGAC 202743 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 202742 CTCAAGAGTGATGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695 Score = 156 bits (172), Expect = 9e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | ||| ||| ||||| ||||||||||| | Sbjct 202411 ACCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGA 202352 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || || || || || || |||||||||||||| || || ||||| || Sbjct 202351 CAGGGTGCGACCGTCTTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGGGG 202292 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| || ||||| | || || | ||||||||||| || | ||||| Sbjct 202291 AATACCCTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATAGTGTCGGAGGACTCGAC 202232 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 202231 CTCGAGCGTGATGGTCTTGCCGGT 202208 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || ||||| | || || || || ||||||||||| | Sbjct 202694 ACCACCACGGAGGCGGAGGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 202635 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| || |||| || || ||||| || Sbjct 202634 CAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCTGGAGG 202575 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||||| || ||| | ||||| ||||| || | || || Sbjct 202574 AATGCCCTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCGATCGTGTCGGATGACTCAAC 202515 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 202514 CTCGAGTGTGATGGTCTTGCCGGT 202491 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || |||| || | ||| || || |||||||||||||| | Sbjct 203150 ACCGCCACGAAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 203091 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| | ||||||||| ||||| || || |||||||| | ||| || ||||| || Sbjct 203090 GAGCGTCCTGCCATCCTCGAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGG 203031 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| | || || || || | ||| || Sbjct 203030 GATACCCTCCTTGTCCTGGATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGATTCCAC 202971 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 202970 CTCCAATGTGATTGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923 >seq273 Length=368666 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || |||| || | || || || |||||||||||||| | Sbjct 357106 ACCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 357165 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 357166 GAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGG 357225 Query 282992 AATACCCTCCTTGTCT 283007 ||| |||||||||||| Sbjct 357226 AATGCCCTCCTTGTCT 357241 >seq143 Length=90640 Score = 102 bits (112), Expect = 2e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| | Sbjct 43131 ACCACCACGGAGACGGAGGACGAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGGA 43072 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| |||||||| || || || || || ||||| | ||| || ||||| || Sbjct 43071 AAGGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 43012 Query 282992 AATACCCTCCTTGTCTTGGATCTT 283015 ||| ||||||||||| |||||||| Sbjct 43011 AATGCCCTCCTTGTCCTGGATCTT 42988 >seq154 Length=40832 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 |||||| | |||||||| | || || ||| |||||||||| || | |||||| | Sbjct 13576 GAGTTCCTCAGCGACGCTCTGCCCTGTGCTCTGCTCGGCATGAACGCCAAGCTCATGTGC 13635 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312 || || || || || || ||||||||| | | | || | || || || || || Sbjct 13636 CAGTACATTGAGTTTGTCGCTGATCGTCTGCTGCTCGCATTGGGCAACACCAAGGTTTAC 13695 Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372 || ||| |||||||| | || |||||| ||| || || || || || |||||| Sbjct 13696 CACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTC 13755 Query 230373 TTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||| ||||||||| | || || || | | | ||||| Sbjct 13756 TTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 13793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046734184156596