Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq290 136 3e-27 >seq290 Length=256071 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || ||| |||||| ||||||||||| || | ||| | | || || Sbjct 203132 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCTGCCATCCTC 203073 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| || |||||||| | ||||||||| || | ||| | ||| ||||| ||| Sbjct 203072 GAGTTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTG 203013 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | ||||| ||| ||||||||||||| || || ||||| Sbjct 203012 GATCTTGGTCTTCACGTTGTCAATGGTATCGCTCGATTCCACCTCCAATGTGATTGTCTT 202953 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||||||||||||||| Sbjct 202952 GCCGGTAAGGGTCTTCACGAAGATTTGCAT 202923 Score = 123 bits (136), Expect = 2e-23 Identities = 142/189 (75%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| |||||||| |||||||| |||| || ||| |||| || Sbjct 202392 ACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAGGGTGCGACCGTCTTCA 202333 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| |||||||||||||| |||||||| |||| || | ||| ||||| ||| Sbjct 202332 AGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGA 202273 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||||| ||| || ||||| | ||| || |||| Sbjct 202272 ATCTTGGTCTTGACATTGT--CGATAGTGTCGGAGGACTCGACCTCGAGCGTGATGGTCT 202215 Query 44307 TTCCCGTGA 44315 | || |||| Sbjct 202214 TGCCGGTGA 202206 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | ||| | | ||||| |||||| || |||||| ||||||||||| Sbjct 202928 TTGCATACCACCACGCAGACGGAGCACCAAGTGAAGAGTTGACTCCTTCTGGATGTTGTA 202869 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | ||| || |||| |||| |||||| || || || || | ||||||||| || Sbjct 202868 GTCCGAGAGAGTACGGCCGTCTTCCAACTGCTTACCAGCGAAAATGAGACGCTGCTGGTC 202809 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | || ||||| || ||||| ||| | | | || || || | || Sbjct 202808 TGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATAGTATCCGAAGA 202749 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || || |||||||| || | ||||| |||||||| ||||| Sbjct 202748 CTCGACCTCAAGAGTGATGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCAT 202695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988759118758