Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01- 12] 374 sequences; 33,379,470 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq290 129 1e-24 seq143 109 1e-18 >seq290 Length=256071 Score = 129 bits (142), Expect = 1e-24 Identities = 155/208 (75%), Gaps = 7/208 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| |||||||| || || || || || || ||||| | ||||||||| ||| Sbjct 202926 CAAATCTTCGTGAAGACCCTTACCGGCAAGACAATCACATTGGAGGTGGAATCGAGC--- 202982 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || ||||| || ||||| || ||||| |||||||| || || ||||||||||||||| Sbjct 202983 GATACCATTGACAACGTGAAGACCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 203042 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || || || || ||||| ||||| ||||| || | || || ||| Sbjct 203043 CAGCGTCTCATCTTTGCTGGTAAGCAACTCGAGGATGGCAGGACGCTCTCGGACTACAAC 203102 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTG 178128 |||| || || || || || || |||| Sbjct 203103 ATCCAGAAGGAGTCCACCCTCCA-CTTG 203129 Score = 122 bits (134), Expect = 2e-22 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || ||||| |||||||| || ||| ||||| ||||| || ||||| Sbjct 202206 TCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGACACTATCGACAATGTCAAGA 202265 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || || || || || |||||||| || | ||||| ||||| | Sbjct 202266 CCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGCTTGATCTTTGCCGGCA 202325 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| ||||| || | || || |||| || ||| | ||||| ||||| || || | Sbjct 202326 AGCAGCTTGAAGACGGTCGCACCCTGTCCGACTACAACATTCAAAAGGAATCCACCCTCC 202385 Query 178123 ATCTTGT 178129 | || || Sbjct 202386 ACCTGGT 202392 >seq143 Length=90640 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || |||||||| ||||| |||||||| || || || || ||||||||||| || || Sbjct 42973 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTC 43032 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 |||||||| ||||| |||||||| ||||| | || ||| |||| || ||| |||| || Sbjct 43033 ATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCCTTTCCGACTACAACATCCAGAAG 43092 Query 178110 GAATCAACACTGCATCTTGT 178129 || || ||||| || || || Sbjct 43093 GAGTCGACACTTCACCTCGT 43112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203725431870556