Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq290 129 1e-24
seq143 109 1e-18
>seq290
Length=256071
Score = 129 bits (142), Expect = 1e-24
Identities = 155/208 (75%), Gaps = 7/208 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
||||| |||||||| || || || || || || ||||| | ||||||||| |||
Sbjct 202926 CAAATCTTCGTGAAGACCCTTACCGGCAAGACAATCACATTGGAGGTGGAATCGAGC--- 202982
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
|| ||||| || ||||| || ||||| |||||||| || || |||||||||||||||
Sbjct 202983 GATACCATTGACAACGTGAAGACCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 203042
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| || || ||||| || || || || ||||| ||||| ||||| || | || || |||
Sbjct 203043 CAGCGTCTCATCTTTGCTGGTAAGCAACTCGAGGATGGCAGGACGCTCTCGGACTACAAC 203102
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTG 178128
|||| || || || || || || ||||
Sbjct 203103 ATCCAGAAGGAGTCCACCCTCCA-CTTG 203129
Score = 122 bits (134), Expect = 2e-22
Identities = 139/187 (74%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || ||||| |||||||| || ||| ||||| ||||| || |||||
Sbjct 202206 TCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCCGACACTATCGACAATGTCAAGA 202265
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
|||||||||||||| || || || || || |||||||| || | ||||| ||||| |
Sbjct 202266 CCAAGATTCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGCTTGATCTTTGCCGGCA 202325
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| ||||| ||||| || | || || |||| || ||| | ||||| ||||| || || |
Sbjct 202326 AGCAGCTTGAAGACGGTCGCACCCTGTCCGACTACAACATTCAAAAGGAATCCACCCTCC 202385
Query 178123 ATCTTGT 178129
| || ||
Sbjct 202386 ACCTGGT 202392
>seq143
Length=90640
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| |||||||| ||||| |||||||| || || || || ||||||||||| || ||
Sbjct 42973 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTC 43032
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109
|||||||| ||||| |||||||| ||||| | || ||| |||| || ||| |||| ||
Sbjct 43033 ATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCCTTTCCGACTACAACATCCAGAAG 43092
Query 178110 GAATCAACACTGCATCTTGT 178129
|| || ||||| || || ||
Sbjct 43093 GAGTCGACACTTCACCTCGT 43112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203725431870556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |