Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20papendorfii_20[genbank_20GCA_5F000817285.1_202015-01-
12] 374 sequences; 33,379,470 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq290 131 2e-25
seq143 114 1e-20
seq273 111 1e-19
>seq290
Length=256071
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || |||||||| || ||||||||||||||| ||||||||
Sbjct 202693 CCACCACGGAGGCGGAGGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 202634
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || |||||||||||||||||||| ||||||||||| ||||| | |||
Sbjct 202633 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCTGGAGGA 202574
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| ||| ||| ||| | | | |||||| ||||| ||
Sbjct 202573 ATGCCCTCCTTGTCCTGGATCTTTGTCTT-GACGTTGTCGATCGTGTCGGATGACTCAAC 202515
Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838
||| | || || || || || ||
Sbjct 202514 CTCGAGTGTGATGGTCTTGCCGGT 202491
Score = 120 bits (132), Expect = 3e-22
Identities = 153/206 (74%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||||| || || ||| ||||| |||||||| ||||||||
Sbjct 202410 CCACCACGGAGGCGGAGGACCAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 202351
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || |||||||||||||| || |||| |||||| ||||| | ||||
Sbjct 202350 AGGGTGCGACCGTCTTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCTGGGGGA 202291
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| | |||||||||| ||| | || | ||| || | || | ||||||| |||||
Sbjct 202290 ATACCCTCCTTGTCC-TGAATCTTGGTCTTGACATTGTCG--ATAGTGTCGGAGGACTCG 202234
Query 41813 ACCTCCACCGTTATCGTTTTACCCGT 41838
||||| | ||| || || || || ||
Sbjct 202233 ACCTCGAGCGTGATGGTCTTGCCGGT 202208
>seq143
Length=90640
Score = 114 bits (126), Expect = 1e-20
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || || ||||||||| ||||| ||||||||
Sbjct 43130 CCACCACGGAGACGGAGGACGAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAA 43071
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || ||||||||||| || ||||| || || ||||| ||||||| ||||
Sbjct 43070 AGGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGA 43011
Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778
| || |||||||||| ||| ||
Sbjct 43010 ATGCCCTCCTTGTCCTGGATCTT 42988
>seq273
Length=368666
Score = 111 bits (122), Expect = 1e-19
Identities = 84/99 (85%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
||||||||| ||||| ||||||||||| ||||| | || || |||||||||||||||||
Sbjct 357142 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAA 357201
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769
|| || ||||| ||||||| ||||| || |||||||||
Sbjct 357202 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 357240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462301838728800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |