Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq49 181 1e-40 >seq49 Length=2757401 Score = 181 bits (200), Expect = 1e-40 Identities = 611/933 (65%), Gaps = 20/933 (2%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 || |||||||| || | || | | | | ||||| ||||||| ||| ||||| | | | Sbjct 441915 TCGAACTCGTCACCGTAGACGTCGGCGAGACCAGGGCATTCATTCGGGCACATGAGAGTC 441856 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || || || | || | || || ||||| || || || |||||||| ||||| || Sbjct 441855 CATTCGCCATTCTCTTGGACACGCTTCATGAAAAGGTCTGGAATCCACAGAGCGTAGAAG 441796 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 ||||| | | | | ||||| || || ||||| || |||||||| |||| | Sbjct 441795 AGATCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAA-GCCAAA 441737 Query 54131 -ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 | ||||| ||||| || || | ||| || | | | || || || ||||| || || Sbjct 441736 GACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTGCCACC 441677 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 ||| || | ||| | ||| ||||| || || || | | ||| ||||| | ||| || || Sbjct 441676 CTGGTCGACGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGA 441617 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGAC 54308 | || ||||| ||| || || || ||||||| || | | | | || | Sbjct 441616 CGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGAT-TCGGTGGACGTTGAGGC 441558 Query 54309 CTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 54368 | || || || || | || ||||| || || ||| || | || || |||||||| | Sbjct 441557 CAATACCGCCAGCGGTCTTGGAGATCAAGGCACATGTCTTGAGTGTGTCGTAGATGCCGT 441498 Query 54369 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG--GTGACGACTAGT 54426 | || || || ||| |||||| | || || ||| |||||| || |||| | ||| Sbjct 441497 CAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGATGG--AGT 441440 Query 54427 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA-GTAGATTGT 54485 || || || |||| || || |||||||| || || | |||| || | |||| | || Sbjct 441439 ACCTGCGTTGAATAGCGTCGGTGAAGCGTGTGTGAAGTACTTTTGTGACATGTAG-TCGT 441381 Query 54486 ACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAAC 54544 | ||||| || || || |||||| || | || || || || ||||||||||| | | Sbjct 441380 AGGTCTCAATGGCCTTCTCGATATCCTCACCG-TGGATACCGACAGCGACACGCATGAGC 441322 Query 54545 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAA 54604 ||||| || || | ||| | | |||| | || || | ||| || |||| Sbjct 441321 ATGTGTTGTGGGCGCTCAGCAACCTTGCCATCGATGCGGAGGAGGTATGAGCGCTCCAGT 441262 Query 54605 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGT 54664 || || || || ||| | | ||| |||||||| ||||| | ||| | |||||||| Sbjct 441261 GTCTTGAAGCCGAAAAACTGGTAGTTGAAGTCTCGGTCGTATACTATAGCCGAGTTGAGC 441202 Query 54665 TTAT---CCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGT 54721 | | | | || || | | | || || ||| ||||| || || | Sbjct 441201 TCCTCTGCGTGATCTTGAATGATCTTGTACACGG-AAT--CGGAAATCATGGGCTGGTTC 441145 Query 54722 TTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttt 54781 || || || || || ||||| ||||| | | |||| | ||| || |||| | || Sbjct 441144 TTGCCGTTCTTGGGGTTGACGTAGTTGTAGAGATCCGATACGACTGCAGAAAATTGCTTC 441085 Query 54782 tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGA 54841 ||||| | ||||| ||||||||||| || || | || || |||||||| ||||| ||| Sbjct 441084 TTTGTCTGCTTGTGGAGATTTGATACTGCGATACGTGCTGCCAGAATGGCGTAATCGGGA 441025 Query 54842 TGTTGTGTAGTACAAGT-GGCTGCTATTTCGGC 54873 || |||| | || || ||||||| | ||||| Sbjct 441024 TG-TGTGGTGGTCATGTAGGCTGCTGTCTCGGC 440993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720590673280