Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq93 107 2e-18
>seq93
Length=1979483
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | |||||||| || | ||||||||||| || ||||| |||||||
Sbjct 927823 CCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 927882
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || |||| || ||||| || || ||| | || || | |||||||||| |||
Sbjct 927883 AGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 927942
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| ||||| || || | | ||| || || | | |||
Sbjct 927943 ATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGATTCCACC 928002
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || || ||||||||||| | || |||||||| ||||||||
Sbjct 928003 TCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | ||| || ||||| || ||||| ||||| | |
Sbjct 928562 CCACCACGAAGGCGGAGGACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGAC 928621
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | ||||| ||||| ||||| || | || | | |||||||||| |||
Sbjct 928622 AGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 928681
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| ||||| | | ||| || || || |||
Sbjct 928682 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCGACC 928741
Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151
|| | ||| ||||||||||||||
Sbjct 928742 TCAAGGGTGATGGTCTTGCCGGT 928764
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | | || | ||||| ||| |||||||| |||||||| ||||| |
Sbjct 928279 CCACCACGCAGGCGCAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAT 928338
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | ||||| ||||| || || || |||| || | |||||| ||| |||
Sbjct 928339 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGA 928398
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || ||||||| || || | | | | || || | |||
Sbjct 928399 ATGCCCTCCTTATCCTGGATCTTTGACTTGACGTTGTCAATGGTGTCGGACGACTCAACC 928458
Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151
|| | |||||||||||||||||
Sbjct 928459 TCGAGCGTAATGGTCTTGCCGGT 928481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422258500105376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |