Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq46 205 1e-47
seq93 131 2e-25
seq2 104 2e-17
seq48 102 8e-17
>seq46
Length=533260
Score = 205 bits (226), Expect = 1e-47
Identities = 217/283 (77%), Gaps = 5/283 (2%)
Strand=Plus/Plus
Query 116639 TGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCC 116698
|||| |||||||| ||||||||||| || |||||||||| ||| ||| | || || |||
Sbjct 196784 TGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAAGAGATTGATCTCTCC 196843
Query 116699 AAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755
||||| ||||||| | |||| ||||||| |||||||| |||||| |||
Sbjct 196844 AAGGATCTTCACGACTGGAACAAGCGCCTGAACGATGACGAGCGCTTCTTCATCTCCCAC 196903
Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815
|| || ||||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct 196904 GTCCTCGCCTTTTTCGCCGCCTCGGATGGCATCGTCAACGAGAACCTGGTCGAGCGTTTC 196963
Query 116816 GCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874
| ||| || || || | | |||||||| || ||||| || || |||||| |||||
Sbjct 196964 TC-CAGCGAAGTACAAATACCGGAGGCGCGTTGTTTCTATGGTTTCCAGATCATGATGGA 197022
Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
||| || |||||||| | || || ||||||||||| |||
Sbjct 197023 GAATGTCCACTCGGAGACTTACTCTCTGCTCATCGACACATAC 197065
Score = 158 bits (174), Expect = 1e-33
Identities = 314/456 (69%), Gaps = 7/456 (2%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGC-GC 117040
|||||||||| ||||| ||||| |||||| | | || ||| | ||| || ||| |
Sbjct 197179 AGAAGGCCGACTGGGCCCTGCGATGGATCTCTGACA-AGAACTCCACTTTTGCCAGCCGT 197237
Query 117041 CTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTT 117100
|| || || ||||| || ||||| || |||| || ||| ||||| |||| ||
Sbjct 197238 CTCGTCGCGTTCGCTGCTGTCGAAGGTATCTTTTTCAGCGGCTCGTTCGCATCCATCTTC 197297
Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGG 117160
|||||||||||||| || || ||||| || || |||||| ||||||||||||||| |
Sbjct 197298 TGGCTCAAGAAACGTGGTCTGATGCCTGGTCTTACTTTCTCCAACGAGCTCATCTCTCGT 197357
Query 117161 GACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG 117220
|| ||||| |||| |||||||| || |||| ||| | | | || ||
Sbjct 197358 GATGAGGGCATGCACACTGACTTTGCTTGCCTGCTCTTCTCTCTTCTCAACACTCGCCCC 197417
Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280
||| || | |||| | ||| |||| || || ||| || ||||| ||||||
Sbjct 197418 AGCAAGGAGGCCGTCCAAGCCATCATCACTGAGGCTGTCCAGATTGAGCAAGAGTTCCTC 197477
Query 117281 ACCGAAGCGCT-GCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338
| ||| ||||| || |||| |||||| || | || || || | |||| || ||||
Sbjct 197478 AGCGACGCGCTACCCTGTGC-TCTGCTCGGCATGAA-CGCCAAGCTCATGTGCCAGTACA 197535
Query 117339 TCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGC 117398
| |||||||| || || | ||||||||| |||| | | ||||| |||| || |
Sbjct 197536 TTGAGTTCGTTGCTGATCGTTTGCTGCTCGCTCTGGGCAACACCAAGGTCTACCACGCCA 197595
Query 117399 CCAACCCGCTGGACTTTATGAACCTCATCTC-CTTG 117433
||||||| | ||||| ||| | |||||| ||||
Sbjct 197596 CCAACCCCTTTGACTTCATGGAGAACATCTCGCTTG 197631
>seq93
Length=1979483
Score = 131 bits (144), Expect = 2e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || || || || ||||| || ||||| | || || ||| | | |
Sbjct 928049 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAGGTGGAATCGAGC 927990
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || |||| ||||| ||||| |||||| |||||||
Sbjct 927989 GACACCATCGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCA 927931
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| || || || ||||| || |||| || || ||| ||||||||
Sbjct 927930 GCAGCGTCTCATCTTTGCTGGTAAGCAGCTTGAAGACGGCCGGACGCTCTCGGACTACAA 927871
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| |||| || ||
Sbjct 927870 CATCCAGAAGGAGTCCACCCTCCA 927847
Score = 122 bits (134), Expect = 9e-23
Identities = 152/206 (74%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
|||| ||||| ||||| || |||| || || | |||||| | | | |||| |||||
Sbjct 928483 TCACCGGCAAGACCATTACGCTCGAGGTTGAGTCGTCCGACACCATTGACAACG-TCAAG 928425
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
||| || | || || |||||||| ||| |||| ||||| || || || | ||| ||
Sbjct 928424 TCAAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATTTTCGCCGGA 928365
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || || | |||||||| |||||||||||| ||||||||| | || |||
Sbjct 928364 AAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAGTCTACTCTG 928305
Query 40891 CATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||| || |||||| || | || ||
Sbjct 928304 CATCTCGTCTTGCGCCTGCGTGGTGG 928279
Score = 122 bits (134), Expect = 9e-23
Identities = 139/187 (74%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771
|||| ||||| ||||||||| | || ||||| || |||||| | | | | | |||
Sbjct 928766 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGA 928707
Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831
|| || | ||||| |||||||||||| |||||||||| || | |||| ||| ||||
Sbjct 928706 GCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCCGGCA 928647
Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891
| ||||| || || | |||||||| ||||||||||||||||||||| | || || |
Sbjct 928646 AGCAGCTTGAGGATGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAATCAACTCTCC 928587
Query 40892 ATCTAGT 40898
| || ||
Sbjct 928586 ACCTGGT 928580
Score = 86.0 bits (94), Expect = 6e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || ||| | || || || |||||||| | || || || | |
Sbjct 928277 ATGCAGATCTTCGTCAAGACGTTGACTGGAAAGACCATCACTCTAGAGGTGGAGTCTTCG 928218
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | |||| ||||| || |||| || || ||||| || ||| | |||||
Sbjct 928217 GATACTATTGACAACG-TCAAGTCCAAGATTCAAGATAAGGAGGGTATTCCCCCAGACCA 928159
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || || | ||| || || || ||||| |||| || || ||| || |||||
Sbjct 928158 GCAGCGCCTGATTTTCGCCGGAAAGCAACTGGAAGACGGCCGTACTCTCTCTGATTACAA 928099
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | || || ||
Sbjct 928098 CATCCAGAAGGAGTCGACTCTTCA 928075
>seq2
Length=1714173
Score = 104 bits (114), Expect = 2e-17
Identities = 89/110 (81%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| |||||||| ||| |||||||||| || ||||||| ||| ||||| ||||| ||
Sbjct 408880 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAG 408939
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|||| ||||| || ||||||||||||||||||||| | || || ||
Sbjct 408940 GACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTCCA 408989
>seq48
Length=384450
Score = 102 bits (112), Expect = 8e-17
Identities = 92/116 (79%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| |||||||| ||| |||||||||| || ||||||| ||| || || || || ||
Sbjct 122085 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGAAAGCAACTCGAG 122026
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| | |||||||| |||||||||||||||||||||| | || || || || ||
Sbjct 122025 GATGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCAACACTCCACCTGGT 121970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218324127360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |