Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq46 205 1e-47 seq93 131 2e-25 seq2 104 2e-17 seq48 102 8e-17 >seq46 Length=533260 Score = 205 bits (226), Expect = 1e-47 Identities = 217/283 (77%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 116639 TGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCC 116698 |||| |||||||| ||||||||||| || |||||||||| ||| ||| | || || ||| Sbjct 196784 TGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAAGAGATTGATCTCTCC 196843 Query 116699 AAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 ||||| ||||||| | |||| ||||||| |||||||| |||||| ||| Sbjct 196844 AAGGATCTTCACGACTGGAACAAGCGCCTGAACGATGACGAGCGCTTCTTCATCTCCCAC 196903 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 || || ||||||||||||||| || ||||||||||||||||| ||||||||||||||| Sbjct 196904 GTCCTCGCCTTTTTCGCCGCCTCGGATGGCATCGTCAACGAGAACCTGGTCGAGCGTTTC 196963 Query 116816 GCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | ||| || || || | | |||||||| || ||||| || || |||||| ||||| Sbjct 196964 TC-CAGCGAAGTACAAATACCGGAGGCGCGTTGTTTCTATGGTTTCCAGATCATGATGGA 197022 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||| || |||||||| | || || ||||||||||| ||| Sbjct 197023 GAATGTCCACTCGGAGACTTACTCTCTGCTCATCGACACATAC 197065 Score = 158 bits (174), Expect = 1e-33 Identities = 314/456 (69%), Gaps = 7/456 (2%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGC-GC 117040 |||||||||| ||||| ||||| |||||| | | || ||| | ||| || ||| | Sbjct 197179 AGAAGGCCGACTGGGCCCTGCGATGGATCTCTGACA-AGAACTCCACTTTTGCCAGCCGT 197237 Query 117041 CTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTT 117100 || || || ||||| || ||||| || |||| || ||| ||||| |||| || Sbjct 197238 CTCGTCGCGTTCGCTGCTGTCGAAGGTATCTTTTTCAGCGGCTCGTTCGCATCCATCTTC 197297 Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGG 117160 |||||||||||||| || || ||||| || || |||||| ||||||||||||||| | Sbjct 197298 TGGCTCAAGAAACGTGGTCTGATGCCTGGTCTTACTTTCTCCAACGAGCTCATCTCTCGT 197357 Query 117161 GACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG 117220 || ||||| |||| |||||||| || |||| ||| | | | || || Sbjct 197358 GATGAGGGCATGCACACTGACTTTGCTTGCCTGCTCTTCTCTCTTCTCAACACTCGCCCC 197417 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 ||| || | |||| | ||| |||| || || ||| || ||||| |||||| Sbjct 197418 AGCAAGGAGGCCGTCCAAGCCATCATCACTGAGGCTGTCCAGATTGAGCAAGAGTTCCTC 197477 Query 117281 ACCGAAGCGCT-GCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338 | ||| ||||| || |||| |||||| || | || || || | |||| || |||| Sbjct 197478 AGCGACGCGCTACCCTGTGC-TCTGCTCGGCATGAA-CGCCAAGCTCATGTGCCAGTACA 197535 Query 117339 TCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGC 117398 | |||||||| || || | ||||||||| |||| | | ||||| |||| || | Sbjct 197536 TTGAGTTCGTTGCTGATCGTTTGCTGCTCGCTCTGGGCAACACCAAGGTCTACCACGCCA 197595 Query 117399 CCAACCCGCTGGACTTTATGAACCTCATCTC-CTTG 117433 ||||||| | ||||| ||| | |||||| |||| Sbjct 197596 CCAACCCCTTTGACTTCATGGAGAACATCTCGCTTG 197631 >seq93 Length=1979483 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||| || ||||| | || || ||| | | | Sbjct 928049 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAGGTGGAATCGAGC 927990 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| ||||| |||||| ||||||| Sbjct 927989 GACACCATCGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCA 927931 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || || || ||||| || |||| || || ||| |||||||| Sbjct 927930 GCAGCGTCTCATCTTTGCTGGTAAGCAGCTTGAAGACGGCCGGACGCTCTCGGACTACAA 927871 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||| || || Sbjct 927870 CATCCAGAAGGAGTCCACCCTCCA 927847 Score = 122 bits (134), Expect = 9e-23 Identities = 152/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||| || |||| || || | |||||| | | | |||| ||||| Sbjct 928483 TCACCGGCAAGACCATTACGCTCGAGGTTGAGTCGTCCGACACCATTGACAACG-TCAAG 928425 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 ||| || | || || |||||||| ||| |||| ||||| || || || | ||| || Sbjct 928424 TCAAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATTTTCGCCGGA 928365 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || || | |||||||| |||||||||||| ||||||||| | || ||| Sbjct 928364 AAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAGTCTACTCTG 928305 Query 40891 CATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| || |||||| || | || || Sbjct 928304 CATCTCGTCTTGCGCCTGCGTGGTGG 928279 Score = 122 bits (134), Expect = 9e-23 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| ||||| ||||||||| | || ||||| || |||||| | | | | | ||| Sbjct 928766 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGA 928707 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || || | ||||| |||||||||||| |||||||||| || | |||| ||| |||| Sbjct 928706 GCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCCGGCA 928647 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || || | |||||||| ||||||||||||||||||||| | || || | Sbjct 928646 AGCAGCTTGAGGATGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAATCAACTCTCC 928587 Query 40892 ATCTAGT 40898 | || || Sbjct 928586 ACCTGGT 928580 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | || || || |||||||| | || || || | | Sbjct 928277 ATGCAGATCTTCGTCAAGACGTTGACTGGAAAGACCATCACTCTAGAGGTGGAGTCTTCG 928218 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| ||||| || |||| || || ||||| || ||| | ||||| Sbjct 928217 GATACTATTGACAACG-TCAAGTCCAAGATTCAAGATAAGGAGGGTATTCCCCCAGACCA 928159 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| || || || ||||| |||| || || ||| || ||||| Sbjct 928158 GCAGCGCCTGATTTTCGCCGGAAAGCAACTGGAAGACGGCCGTACTCTCTCTGATTACAA 928099 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 928098 CATCCAGAAGGAGTCGACTCTTCA 928075 >seq2 Length=1714173 Score = 104 bits (114), Expect = 2e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| ||| |||||||||| || ||||||| ||| ||||| ||||| || Sbjct 408880 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAG 408939 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| ||||| || ||||||||||||||||||||| | || || || Sbjct 408940 GACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTCCA 408989 >seq48 Length=384450 Score = 102 bits (112), Expect = 8e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| ||| |||||||||| || ||||||| ||| || || || || || Sbjct 122085 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCTGGAAAGCAACTCGAG 122026 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | |||||||| |||||||||||||||||||||| | || || || || || Sbjct 122025 GATGGTCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCAACACTCCACCTGGT 121970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218324127360