Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq48 111 1e-19
seq93 107 2e-18
seq2 105 6e-18
>seq48
Length=384450
Score = 111 bits (122), Expect = 1e-19
Identities = 94/116 (81%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| ||| ||||| || || |||||||| ||| | ||||| |||||||
Sbjct 121970 ACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCG 122029
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| || ||||||||| |||||||||||||||| || || || ||||||||||||||
Sbjct 122030 AGTTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 122085
>seq93
Length=1979483
Score = 107 bits (118), Expect = 2e-18
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || |||| | | ||||||||||| || ||||| || || |||||||| ||
Sbjct 927822 ACCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 927881
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| || || || || ||||| || ||||| |||||||||||||||| || || ||
Sbjct 927882 GAGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGG 927941
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTC---TC 118687
|| ||||||||||| ||| || || || | |||| |||||| |||| ||
Sbjct 927942 GATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTC---GCTCGATTC 927998
Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| | || | ||| |||||||| || || || ||||| || |||||
Sbjct 927999 CACCTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049
Score = 100 bits (110), Expect = 2e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || || || || || |||||||| ||| || ||||| ||||||
Sbjct 928580 ACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCCTCA 928639
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| |||| | |||||||| || || || ||||||||||||||
Sbjct 928640 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 928699
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | | ||||||||| | ||| | || |||
Sbjct 928700 ATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 928759
Query 118710 CCGGT 118714
|||||
Sbjct 928760 CCGGT 928764
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || ||||||||||| ||| | ||||| |||||| ||||| |||||
Sbjct 928309 GTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCAAGCTGCTTTCCG 928368
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || || ||||||||||| || || ||||||||||| || || ||| ||
Sbjct 928369 GCGAAAATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTTGACTTG 928428
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| | || | |||||| | ||| ||||||| || | || ||||||||
Sbjct 928429 ACGTTGTCAATGGTGTCGGACGACTCAACCTCGAGCGTAATGGTCTTGCCGGT 928481
>seq2
Length=1714173
Score = 105 bits (116), Expect = 6e-18
Identities = 94/118 (80%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| || | |||||| ||||||
Sbjct 408995 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCG 408936
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
||||| || || ||| |||||||||||||||| || || || ||||||||||||||||
Sbjct 408935 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTG 408878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829680926112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |