Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq48 111 1e-19 seq93 107 2e-18 seq2 105 6e-18 >seq48 Length=384450 Score = 111 bits (122), Expect = 1e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| ||| ||||| || || |||||||| ||| | ||||| ||||||| Sbjct 121970 ACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCG 122029 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || || ||||||||| |||||||||||||||| || || || |||||||||||||| Sbjct 122030 AGTTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 122085 >seq93 Length=1979483 Score = 107 bits (118), Expect = 2e-18 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || |||| | | ||||||||||| || ||||| || || |||||||| || Sbjct 927822 ACCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 927881 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | || || || || ||||| || ||||| |||||||||||||||| || || || Sbjct 927882 GAGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGG 927941 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTC---TC 118687 || ||||||||||| ||| || || || | |||| |||||| |||| || Sbjct 927942 GATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTC---GCTCGATTC 927998 Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| | || | ||| |||||||| || || || ||||| || ||||| Sbjct 927999 CACCTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || || || || || |||||||| ||| || ||||| |||||| Sbjct 928580 ACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCCTCA 928639 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| | |||||||| || || || |||||||||||||| Sbjct 928640 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 928699 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | | ||||||||| | ||| | || ||| Sbjct 928700 ATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 928759 Query 118710 CCGGT 118714 ||||| Sbjct 928760 CCGGT 928764 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || ||||||||||| ||| | ||||| |||||| ||||| ||||| Sbjct 928309 GTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCAAGCTGCTTTCCG 928368 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || || ||||||||||| || || ||||||||||| || || ||| || Sbjct 928369 GCGAAAATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTTGACTTG 928428 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || | || | |||||| | ||| ||||||| || | || |||||||| Sbjct 928429 ACGTTGTCAATGGTGTCGGACGACTCAACCTCGAGCGTAATGGTCTTGCCGGT 928481 >seq2 Length=1714173 Score = 105 bits (116), Expect = 6e-18 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| || || |||||||| || | |||||| |||||| Sbjct 408995 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCG 408936 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||||| || || ||| |||||||||||||||| || || || |||||||||||||||| Sbjct 408935 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTG 408878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829680926112