Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq93 152 6e-32 >seq93 Length=1979483 Score = 152 bits (168), Expect = 6e-32 Identities = 178/235 (76%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010 || || || || | || ||| | |||||| || | ||| |||||| || || ||||| Sbjct 927817 TACTGACCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAG 927876 Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070 || | || ||||| |||| || |||||||||||||| || ||||| ||||||||||| Sbjct 927877 TCCGAGAGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCC 927936 Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCG 43128 | || | | |||||||||| ||| | || | |||| ||| | | | |||||||||| Sbjct 927937 GGGGGGATACCCTCCTTGTCC-TGAATCTTCGACTTGA-CGTTGTCGATGGTGTCGCTCG 927994 Query 43129 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || | |||||| || ||||| || || ||||| |||||||||||||| Sbjct 927995 ATTCCACCTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || |||||| || || |||||||||| ||||| || | Sbjct 928062 ACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAGAGAGTACGGCC 928121 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || || ||||| || ||||| || || ||||||||||| | || | | |||||| Sbjct 928122 GTCTTCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATACCCTCCTT 928181 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 43145 | | ||| | || | |||| ||| | | | || || || ||||| || | ||| Sbjct 928182 AT-CTTGAATCTTGGACTTGA-CGTTGTCAATAGTATCCGAAGACTCCACCTCTAGAGTG 928239 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || || | |||||| || ||||| ||||| Sbjct 928240 ATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 928277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816627910080