Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq93 125 5e-24
seq2 86.0 4e-12
>seq93
Length=1979483
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | ||||||| ||| | || || ||||| ||||||||||| ||
Sbjct 927823 CCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 927882
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| ||| |||| || | |||||| || || || ||||| ||||||||||| |||
Sbjct 927883 AGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 927942
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | ||| ||||||| ||
Sbjct 927943 ATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGATTCCACC 928002
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||| || |||||||| || || || |||||||| |||||
Sbjct 928003 TCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049
Score = 109 bits (120), Expect = 4e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | ||| ||| ||||| ||||||||||||||||| || | ||
Sbjct 928577 AGGACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCC 928636
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| ||||| || | ||||||||||| ||| | || |||||||||
Sbjct 928637 TCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 928696
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | || | |||| || ||||| || | ||||||||
Sbjct 928697 TGGATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTC 928756
Query 34358 TTGCCGGTGA 34367
||||||||||
Sbjct 928757 TTGCCGGTGA 928766
Score = 100 bits (110), Expect = 2e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | || || || || | |||| || ||||| ||||||||||||||
Sbjct 928279 CCACCACGCAGGCGCAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAT 928338
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | |||||| || |||||||| || |||||||| || |||
Sbjct 928339 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGA 928398
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||| || |||||| ||| | | | | || | |||| ||| || ||
Sbjct 928399 ATGCCCTCCTTATCCTGGATCTTTGACTTGACGTTGTCAATGGTGTCGGACGACTCAACC 928458
Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367
|| | ||| ||||| ||||||||||
Sbjct 928459 TCGAGCGTAATGGTCTTGCCGGTGA 928483
Score = 98.7 bits (108), Expect = 6e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||||||| ||| | ||| || ||||| |||||||| || ||
Sbjct 928051 CCACCACGCAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAG 928110
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| |||| |||| |||| ||||| || |||||||| || ||||||||||| |||
Sbjct 928111 AGAGTACGGCCGTCTTCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGA 928170
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||| || ||||| ||| | | | | || | ||| | || || ||
Sbjct 928171 ATACCCTCCTTATCTTGAATCTTGGACTTGACGTTGTCAATAGTATCCGAAGACTCCACC 928230
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| || || || | || || || |||||||||||
Sbjct 928231 TCTAGAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 928277
>seq2
Length=1714173
Score = 86.0 bits (94), Expect = 4e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || ||||| | || |||| ||| | || || ||||| ||||||||||| ||
Sbjct 409014 TCCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 408955
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| |||| || | ||||||||| ||||| ||||| ||||||||||| |||
Sbjct 408954 AAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGG 408895
Query 34282 CACGCTCTCCTTGTC 34296
| || |||||||||
Sbjct 408894 AATGCCCTCCTTGTC 408880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071464508160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |