Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq93 111 1e-19 >seq93 Length=1979483 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| ||||||||||| || || |||| || Sbjct 927841 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGGCCGTCTTCA 927900 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || || | ||||| ||||| || || | ||||||||||||| | Sbjct 927901 AGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGA 927960 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | |||||||||| || ||||||||| Sbjct 927961 ATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGATTCCACCTCCAACGTGATCGTCTTG 928020 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| |||||||||||||| Sbjct 928021 CCGGTAAGGGTCTTGACAAAGATTTGCAT 928049 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||||||| |||||||| || || || |||| ||| Sbjct 928069 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAGAGAGTACGGCCGTCTTCC 928128 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| ||||||||||| |||| ||||| ||||| || || | ||||||||| || | Sbjct 928129 AGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATACCCTCCTTATCTTGA 928188 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||| | ||||||||| | || || ||||| Sbjct 928189 ATCTTGGACTTGACGTTGTCAATAGTATCCGAAGACTCCACCTCTAGAGTGATGGTCTTT 928248 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| || ||||| ||||| Sbjct 928249 CCAGTCAACGTCTTGACGAAGATCTGCAT 928277 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || || |||||||| |||||||||||| ||| |||| | || || Sbjct 928580 ACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCCTCA 928639 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || |||||||| ||||| ||||| ||||| || || | |||||||||||| Sbjct 928640 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 928696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074545162856