Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq49 212 8e-50
>seq49
Length=2757401
Score = 212 bits (234), Expect = 8e-50
Identities = 620/937 (66%), Gaps = 20/937 (2%)
Strand=Plus/Minus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
||||||||||| || | || | | | | | ||| ||||||| ||| ||||| | | |
Sbjct 441915 TCGAACTCGTCACCGTAGACGTCGGCGAGACCAGGGCATTCATTCGGGCACATGAGAGTC 441856
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308
|| || || | || | || || ||||| || || || |||||||| ||||| ||
Sbjct 441855 CATTCGCCATTCTCTTGGACACGCTTCATGAAAAGGTCTGGAATCCACAGAGCGTAGAAG 441796
Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368
||||| | | | | ||||| || || ||||| || |||||||| |||| |
Sbjct 441795 AGATCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAA-GCCAAA 441737
Query 63369 -ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427
| ||||| ||||| || || | ||| || || | | || || || ||||| || ||
Sbjct 441736 GACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTGCCACC 441677
Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487
||| || | ||| | ||| ||||| || || || | | ||| ||||| | |||||||||
Sbjct 441676 CTGGTCGACGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGA 441617
Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT-AGAC 63546
| || ||||| ||| || || || ||||||| || | | | | || |
Sbjct 441616 CGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGAT-TCGGTGGACGTTGAGGC 441558
Query 63547 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTT 63606
| || || || || | || ||||| || || ||| || | ||||| |||||||| |
Sbjct 441557 CAATACCGCCAGCGGTCTTGGAGATCAAGGCACATGTCTTGAGTGTGTCGTAGATGCCGT 441498
Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTT--GGTGACGAGTAGT 63664
| ||||| || || |||||| | || || ||| |||||| | ||||| | |||
Sbjct 441497 CAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGA--TGGAGT 441440
Query 63665 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGT 63723
|| || || |||| || || |||||||| || || | |||| || | |||| | ||
Sbjct 441439 ACCTGCGTTGAATAGCGTCGGTGAAGCGTGTGTGAAGTACTTTTGTGACATGTAG-TCGT 441381
Query 63724 ACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAAC 63782
| |||||||| || || |||||| || | || || || || ||||||||||| | |
Sbjct 441380 AGGTCTCAATGGCCTTCTCGATATCCTCACCG-TGGATACCGACAGCGACACGCATGAGC 441322
Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842
||||| || || | ||| ||| ||| | || | | ||| || ||||
Sbjct 441321 ATGTGTTGTGGGCGCTCAGCAACCTTGCCATCGATGCGGAGGAGGTATGAGCGCTCCAGT 441262
Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902
|| || || || ||| | | ||| |||||||| ||||| | ||| |||| ||||||
Sbjct 441261 GTCTTGAAGCCGAAAAACTGGTAGTTGAAGTCTCGGTCGTATACTATAGCCGAGTTGAGC 441202
Query 63903 TTAT---CCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGT 63959
| | | | || || | | | | || || ||| ||||| || || |
Sbjct 441201 TCCTCTGCGTGATCTTGAATGATCTTGTACACGG-AAT--CGGAAATCATGGGCTGGTTC 441145
Query 63960 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 64019
|| || || || || || || |||||| | | |||| | ||| || |||| | ||
Sbjct 441144 TTGCCGTTCTTGGGGTTGACGTAGTTGTAGAGATCCGATACGACTGCAGAAAATTGCTTC 441085
Query 64020 tttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGA 64079
||||| | |||||| |||||||||| || || | || || |||||||| ||||| |||
Sbjct 441084 TTTGTCTGCTTGTGGAGATTTGATACTGCGATACGTGCTGCCAGAATGGCGTAATCGGGA 441025
Query 64080 TGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCC 64115
|| |||| | || || ||||||| | ||||| |||
Sbjct 441024 TG-TGTGGTGGTCATGTAGGCTGCTGTCTCGGCGGCC 440989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816529310080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |