Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq49 188 9e-43
>seq49
Length=2757401
Score = 188 bits (208), Expect = 9e-43
Identities = 615/937 (66%), Gaps = 20/937 (2%)
Strand=Plus/Minus
Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041
||||||||||| || | || | | | | ||||| ||||||| ||| ||||| | | |
Sbjct 441915 TCGAACTCGTCACCGTAGACGTCGGCGAGACCAGGGCATTCATTCGGGCACATGAGAGTC 441856
Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101
|| || || | || | || || ||||| || || || |||||||| ||||| ||
Sbjct 441855 CATTCGCCATTCTCTTGGACACGCTTCATGAAAAGGTCTGGAATCCACAGAGCGTAGAAG 441796
Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161
| ||| | | | | ||||| || || ||||| || |||||||| |||| |
Sbjct 441795 AGATCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAA-GCCAAA 441737
Query 66162 -ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220
| |||| ||||| || || | ||| || || | | || || || ||||| || ||
Sbjct 441736 GACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTGCCACC 441677
Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280
||| || | ||| | ||| ||||| || || || | | ||| ||||| | ||| || ||
Sbjct 441676 CTGGTCGACGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGA 441617
Query 66281 TGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT-AGAC 66339
|| || ||||| ||| || || || | ||||| || | | | | || |
Sbjct 441616 CGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGAT-TCGGTGGACGTTGAGGC 441558
Query 66340 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 66399
| || || || || | || ||||| || || ||| || | || || |||||||| |
Sbjct 441557 CAATACCGCCAGCGGTCTTGGAGATCAAGGCACATGTCTTGAGTGTGTCGTAGATGCCGT 441498
Query 66400 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT--GGTGACGACTAGT 66457
| || || || ||| |||||| | || || ||| |||||| | ||||| | |||
Sbjct 441497 CAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGATG--GAGT 441440
Query 66458 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGT 66516
|| || || |||| || || |||||||| || || | |||| || | |||| | ||
Sbjct 441439 ACCTGCGTTGAATAGCGTCGGTGAAGCGTGTGTGAAGTACTTTTGTGACATGTAG-TCGT 441381
Query 66517 ACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAAC 66575
| |||||||| || || |||||| || | || || || || ||||||||||| | |
Sbjct 441380 AGGTCTCAATGGCCTTCTCGATATCCTCACCG-TGGATACCGACAGCGACACGCATGAGC 441322
Query 66576 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 66635
||||| || || | ||| | | |||| | || | | ||| || ||||
Sbjct 441321 ATGTGTTGTGGGCGCTCAGCAACCTTGCCATCGATGCGGAGGAGGTATGAGCGCTCCAGT 441262
Query 66636 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 66695
|| || || || ||| | | ||| |||||||| ||||| | ||| ||||||||||
Sbjct 441261 GTCTTGAAGCCGAAAAACTGGTAGTTGAAGTCTCGGTCGTATACTATAGCCGAGTTGAGC 441202
Query 66696 TTAT---CCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGT 66752
| | | | || || | | | || || ||| ||||| || || |
Sbjct 441201 TCCTCTGCGTGATCTTGAATGATCTTGTACACGG-AAT--CGGAAATCATGGGCTGGTTC 441145
Query 66753 TTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 66812
|| || || || || ||||| |||||| | | |||| | ||| || |||| | ||
Sbjct 441144 TTGCCGTTCTTGGGGTTGACGTAGTTGTAGAGATCCGATACGACTGCAGAAAATTGCTTC 441085
Query 66813 tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGA 66872
||||| | ||||| ||||||||||| || || | || || | |||||| ||||| |||
Sbjct 441084 TTTGTCTGCTTGTGGAGATTTGATACTGCGATACGTGCTGCCAGAATGGCGTAATCGGGA 441025
Query 66873 TGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCC 66908
|| |||| | || || ||||||| | ||||| |||
Sbjct 441024 TG-TGTGGTGGTCATGTAGGCTGCTGTCTCGGCGGCC 440989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658171681106240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |