Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq49 188 9e-43 >seq49 Length=2757401 Score = 188 bits (208), Expect = 9e-43 Identities = 615/937 (66%), Gaps = 20/937 (2%) Strand=Plus/Minus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 ||||||||||| || | || | | | | ||||| ||||||| ||| ||||| | | | Sbjct 441915 TCGAACTCGTCACCGTAGACGTCGGCGAGACCAGGGCATTCATTCGGGCACATGAGAGTC 441856 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 || || || | || | || || ||||| || || || |||||||| ||||| || Sbjct 441855 CATTCGCCATTCTCTTGGACACGCTTCATGAAAAGGTCTGGAATCCACAGAGCGTAGAAG 441796 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | ||| | | | | ||||| || || ||||| || |||||||| |||| | Sbjct 441795 AGATCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAA-GCCAAA 441737 Query 66162 -ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220 | |||| ||||| || || | ||| || || | | || || || ||||| || || Sbjct 441736 GACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTGCCACC 441677 Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280 ||| || | ||| | ||| ||||| || || || | | ||| ||||| | ||| || || Sbjct 441676 CTGGTCGACGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGA 441617 Query 66281 TGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT-AGAC 66339 || || ||||| ||| || || || | ||||| || | | | | || | Sbjct 441616 CGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGAT-TCGGTGGACGTTGAGGC 441558 Query 66340 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 66399 | || || || || | || ||||| || || ||| || | || || |||||||| | Sbjct 441557 CAATACCGCCAGCGGTCTTGGAGATCAAGGCACATGTCTTGAGTGTGTCGTAGATGCCGT 441498 Query 66400 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT--GGTGACGACTAGT 66457 | || || || ||| |||||| | || || ||| |||||| | ||||| | ||| Sbjct 441497 CAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGATG--GAGT 441440 Query 66458 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGT 66516 || || || |||| || || |||||||| || || | |||| || | |||| | || Sbjct 441439 ACCTGCGTTGAATAGCGTCGGTGAAGCGTGTGTGAAGTACTTTTGTGACATGTAG-TCGT 441381 Query 66517 ACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAAC 66575 | |||||||| || || |||||| || | || || || || ||||||||||| | | Sbjct 441380 AGGTCTCAATGGCCTTCTCGATATCCTCACCG-TGGATACCGACAGCGACACGCATGAGC 441322 Query 66576 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 66635 ||||| || || | ||| | | |||| | || | | ||| || |||| Sbjct 441321 ATGTGTTGTGGGCGCTCAGCAACCTTGCCATCGATGCGGAGGAGGTATGAGCGCTCCAGT 441262 Query 66636 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 66695 || || || || ||| | | ||| |||||||| ||||| | ||| |||||||||| Sbjct 441261 GTCTTGAAGCCGAAAAACTGGTAGTTGAAGTCTCGGTCGTATACTATAGCCGAGTTGAGC 441202 Query 66696 TTAT---CCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGT 66752 | | | | || || | | | || || ||| ||||| || || | Sbjct 441201 TCCTCTGCGTGATCTTGAATGATCTTGTACACGG-AAT--CGGAAATCATGGGCTGGTTC 441145 Query 66753 TTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 66812 || || || || || ||||| |||||| | | |||| | ||| || |||| | || Sbjct 441144 TTGCCGTTCTTGGGGTTGACGTAGTTGTAGAGATCCGATACGACTGCAGAAAATTGCTTC 441085 Query 66813 tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGA 66872 ||||| | ||||| ||||||||||| || || | || || | |||||| ||||| ||| Sbjct 441084 TTTGTCTGCTTGTGGAGATTTGATACTGCGATACGTGCTGCCAGAATGGCGTAATCGGGA 441025 Query 66873 TGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCC 66908 || |||| | || || ||||||| | ||||| ||| Sbjct 441024 TG-TGTGGTGGTCATGTAGGCTGCTGTCTCGGCGGCC 440989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171681106240