Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq49 215 7e-51 >seq49 Length=2757401 Score = 215 bits (238), Expect = 7e-51 Identities = 620/937 (66%), Gaps = 20/937 (2%) Strand=Plus/Minus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 ||||||||||| || | | | | | | ||||| ||||||||||| ||||| | | | Sbjct 441915 TCGAACTCGTCACCGTAGACGTCGGCGAGACCAGGGCATTCATTCGGGCACATGAGAGTC 441856 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063 || || |||| || | || || ||||| || || || |||||||| ||||| || Sbjct 441855 CATTCGCCATTCTCTTGGACACGCTTCATGAAAAGGTCTGGAATCCACAGAGCGTAGAAG 441796 Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123 ||||| | | | | |||||| || || ||||| || |||||||| |||| | Sbjct 441795 AGATCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAA-GCCAAA 441737 Query 72124 -ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182 | ||||| ||||| || || | ||| || || | | ||||| || ||||| || || Sbjct 441736 GACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTGCCACC 441677 Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242 ||| || | ||| | ||| ||||| || || || | | ||| ||||| | ||| || || Sbjct 441676 CTGGTCGACGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGA 441617 Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGAT-AGAC 72301 | || ||||| ||| || || || ||||||| || | | | | | || | Sbjct 441616 CGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGAT-TCGGTGGACGTTGAGGC 441558 Query 72302 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 72361 | || || || || | || ||||| || || ||| || | || || |||||||| | Sbjct 441557 CAATACCGCCAGCGGTCTTGGAGATCAAGGCACATGTCTTGAGTGTGTCGTAGATGCCGT 441498 Query 72362 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT--GGTGACGACTAGT 72419 | || || || ||| |||||| | || || ||| |||||| | ||||| | ||| Sbjct 441497 CAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGATG--GAGT 441440 Query 72420 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGT 72478 || || || |||| || || |||||||| || || | |||| |||| |||| | || Sbjct 441439 ACCTGCGTTGAATAGCGTCGGTGAAGCGTGTGTGAAGTACTTTTGTGACATGTAG-TCGT 441381 Query 72479 ACGTCTCAATAGCTGATTCTATATCC-CATTGATGTATTCCTACCGCGACACGCATTAAC 72537 | |||||||| || || |||||| || | || || || || ||||||||||| | | Sbjct 441380 AGGTCTCAATGGCCTTCTCGATATCCTCACCG-TGGATACCGACAGCGACACGCATGAGC 441322 Query 72538 ATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAA 72597 || || || || | ||| | | |||| || || | | ||| || |||| Sbjct 441321 ATGTGTTGTGGGCGCTCAGCAACCTTGCCATCGATGCGGAGGAGGTATGAGCGCTCCAGT 441262 Query 72598 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGT 72657 || || || || ||| | | ||| |||||||| ||||| | ||| |||| ||||| Sbjct 441261 GTCTTGAAGCCGAAAAACTGGTAGTTGAAGTCTCGGTCGTATACTATAGCCGAGTTGAGC 441202 Query 72658 TTAT---CCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGT 72714 | | | | || || | | | | || || | ||||| || || | Sbjct 441201 TCCTCTGCGTGATCTTGAATGATCTTGTACACGG---AATCGGAAATCATGGGCTGGTTC 441145 Query 72715 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 72774 || || || || || || || |||||| | | |||| | ||| || |||| | || Sbjct 441144 TTGCCGTTCTTGGGGTTGACGTAGTTGTAGAGATCCGATACGACTGCAGAAAATTGCTTC 441085 Query 72775 tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGA 72834 ||||| | |||||| ||||||||||| || || | || || |||||||| ||||| ||| Sbjct 441084 TTTGTCTGCTTGTGGAGATTTGATACTGCGATACGTGCTGCCAGAATGGCGTAATCGGGA 441025 Query 72835 TGTTGTGTAGTACAAGT-GGCTGCTATTTCTGCTGCC 72870 || |||| | || || ||||||| | || || ||| Sbjct 441024 TG-TGTGGTGGTCATGTAGGCTGCTGTCTCGGCGGCC 440989 Score = 93.3 bits (102), Expect = 6e-14 Identities = 299/462 (65%), Gaps = 3/462 (1%) Strand=Plus/Minus Query 70794 GTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGT 70853 ||| | ||| || ||||| |||| || || || | ||||| || ||||||||||| || Sbjct 443074 GTCGACTGTGAATTGAATTGGAGCAGAAGCAGCCATGGTACGGAGGTAGTACATGCCCGT 443015 Query 70854 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATC 70913 || ||||| || |||||||| ||| ||||| || | ||| | | || || Sbjct 443014 CTTGAGACCAAGCTTCCATCCGGCAAAGTGCATGGAAGTGATCTTGCCCATGGTTGGCTC 442955 Query 70914 GGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 70973 ||||| || |||| ||||| ||||| |||||||| || | ||| |||||||| Sbjct 442954 CTTCATGTGGATGTTCAGTGACTGTGACTGATCAATGAAGGCACCACGGTCAGCAGCCAT 442895 Query 70974 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTC 71033 | || || || ||| | |||||||||| ||| || || | ||| | || || Sbjct 442894 CTGAATAATGGTTCGTTGCGAGATTTCCCAAACAGTCTTGTAGAGGGTCTTGGTTTCCTC 442835 Query 71034 TGGAAGGTT-TGTATTCT--GAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTC 71090 || | ||| | ||||| |||||| || || || || || || | || || || | Sbjct 442834 AGGGATGTTGGGGATTCTTGCAATGGAACCGCCTTCAGCGATGATGCGGTTCTTCATGTT 442775 Query 71091 TTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAA 71150 || ||| | | ||| | | | || | || || || ||||| || Sbjct 442774 CTCGGACCACAGGCCCATGTCGACAAGGTCCTTGAGCAACCATGGGTTGACAACTTGGAA 442715 Query 71151 TTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATT 71210 || || | | ||| | |||| ||| || || ||| || || || | ||||||| Sbjct 442714 CTCACCCGCGAGTACACGGCGAGAGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCATT 442655 Query 71211 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 71252 ||||| | ||| || | ||| || ||||| ||||| ||||| Sbjct 442654 GTTTCCGAGAATCTGGGAAGTCGAGGCAGTTGGCATGGGTGC 442613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138059063360