Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq46 168 1e-36 seq49 138 2e-27 >seq46 Length=533260 Score = 168 bits (186), Expect = 1e-36 Identities = 571/890 (64%), Gaps = 72/890 (8%) Strand=Plus/Plus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| |||||||||| ||||| |||| || || ||||| | ||||||| | ||||| ||| Sbjct 196784 TGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAAGAGATTGATCTCTCC 196843 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 ||||| || |||| ||| | | || ||| || ||||| || || || ||| Sbjct 196844 AAGGATCTTCACGACTGGAACAAGCGCCTGAACGATGACGAGCGCTTCTTCATCTCCCAC 196903 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTC 125201 | | ||||| || |||| ||| ||||| ||||||||||| || ||| | || ||| Sbjct 196904 GTCCTCGCCTTTTTCGCCGCCTCGGATGGCATCGTCAACGAGAACCTGGTCGAGCGTTTC 196963 Query 125202 TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAG 125261 || || | || || |||| | || || || || ||||| |||||||| ||| Sbjct 196964 TCCAGCGAAGTACAAATACCGGAGGCGCGTTGTTTCTATGGTTTCCAGATCATGATGGAG 197023 Query 125262 AACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---GCAA 125318 || || |||||||| | |||||| || || |||| ||||| |||| || ||| Sbjct 197024 AATGTCCACTCGGAGACTTACTCTCTGCTCATCGACACATACATCAGCGAGCCAAGGCAG 197083 Query 125319 CGTAAACACATGCTCTTTAACGCAATCGAC-ACGGT----------GC------------ 125355 || || | || || ||||| |||||| || || || Sbjct 197084 CGCAAGTA---TCTTTTCAACGCTATCGACAACAGTAAGTTACCCCGCAACGCGCTTCAG 197140 Query 125356 ------CGTCT--------------------ATACGTAAAAAGGCTCAATGGGTGATTCG 125389 ||||| || || || ||||| | |||| | || Sbjct 197141 TTTACACGTCTAACGCGTCATAGTTCCCTGCATCCGCAAGAAGGCCGACTGGGCCCTGCG 197200 Query 125390 GTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGA 125449 |||||| |||| | || || | | ||| | | || || || ||||| || || || Sbjct 197201 ATGGATCTCTGACAAGAACTCCACTTTTGCCAGCCGTCTCGTCGCGTTCGCTGCTGTCGA 197260 Query 125450 GGGCATCTTCTT-TTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCA 125508 || ||||| || ||| | | || || ||||||| ||||||||||| || || || | Sbjct 197261 AGGTATCTTTTTCAGCGGCTCG-TTCGCATCCATCTTCTGGCTCAAGAAACGTGGTCTGA 197319 Query 125509 TGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACT 125568 |||| || || || | |||||| | || ||||| || |||||| | ||| ||||| Sbjct 197320 TGCCTGGTCTTACTTTCTCCAACGAGCTCATCTCTCGTGATGAGGGCATGCACACTGACT 197379 Query 125569 TTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGG 125628 |||| || || || || ||| || | | | ||||| | || | Sbjct 197380 TTGCTTGCCTGCTCTT------CTCTCT---TCTCAACACTCGCCCCAGCAAGGAGGCCG 197430 Query 125629 TCATCAA--CATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCT 125686 || ||| ||| | || || || || ||| || |||||||| || | ||| | || Sbjct 197431 TC--CAAGCCATCATCACTGAGGCTGTCCAGATTGAGCAAGAGTTCCTCAGCGACGCGCT 197488 Query 125687 ACCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGG 125745 ||| | || || | ||||||||| |||||| |||||| ||||||| ||||| || | Sbjct 197489 ACC-CTGTGCTCTGCTCGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTCGTTG 197547 Query 125746 CAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTG 125805 | |||||| | ||| || || | |||| | ||| |||||| || ||||||| Sbjct 197548 CTGATCGTTTGCTGCTCGCTCTGGGCAACACCAAGGTCTACCACGCCACCAACCCCTTTG 197607 Query 125806 ATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 | |||||| | ||| || || | || ||||||||||| ||||||||| Sbjct 197608 ACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAG 197657 >seq49 Length=2757401 Score = 138 bits (152), Expect = 2e-27 Identities = 322/483 (67%), Gaps = 2/483 (0%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | || ||||| | || || |||||||| || Sbjct 441674 CAGGGTGGCAACAAGCGTCCGGGTGCCTTTGCTATCTACCTTGAGCCATGGCACGCTGAT 441733 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || |||| ||| |||| | ||||| ||| ||| || |||| || || | || Sbjct 441734 GTCTTTGGCTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCTCGTGAT 441793 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 | || || || || ||| | ||||| | ||||||||||| ||| | || |||| | Sbjct 441794 CTCTTCTACGCTCTGTGGATTCCAGACCTTTTCATGAAGCGTGTCCAAGAGAATGGCGAA 441853 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || |||||||| | | || ||||| |||| || || || ||||| Sbjct 441854 TGGACTCTCATGTGCCCGAATGAATGCCCTGGTCTCGCCGACGTCTACGGTGACGAGTTC 441913 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGCACG 97174 ||||| |||| | ||||||| | || | | |||||||| ||| || | Sbjct 441914 GAGGCACTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCGTGAGACTGTTCG-CGCCCA 441972 Query 97175 AGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTA 97234 |||| ||| | |||||| | ||| ||| || ||||| | || | || ||||| Sbjct 441973 GAAACTCTGGTATGCCATCCTCGAGGCCCAGACCGAAACTGGTAACCCCTTTATGCTCTA 442032 Query 97235 CAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAA 97294 ||||||| | || ||||| |||||||| |||||||||| || ||||||| Sbjct 442033 CAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACTTGGGCACTATTCGCAGCTCCAA 442092 Query 97295 TCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGC 97354 ||||||| || ||||| |||||| | |||| || ||| || |||||| ||||| Sbjct 442093 CTTGTGCACAGAGATTGTTGAGTACACTGCTCCTGATGAGGTTGCTGTTTGCAACCTGGC 442152 Query 97355 ATC 97357 || Sbjct 442153 TTC 442155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057940199360