Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 199 6e-47
>seq1
Length=3101661
Score = 199 bits (220), Expect = 6e-47
Identities = 210/274 (77%), Gaps = 2/274 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| |||||| || |||||||| || ||||||||||| |||||
Sbjct 2896786 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 2896728
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| ||||| |||||||| ||||||||| |||||| || |||| |||||||
Sbjct 2896727 CCGTCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAAGAGAC 2896668
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| ||||||| ||| ||| |||| ||| || || || || ||
Sbjct 2896667 CCGTGGTGTCCTCAAGACCTTCCTCGAGAGCGTCATCCGTGACGCCGTCACATACACTGA 2896608
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| |||||||| | || | ||||| || | || || || ||
Sbjct 2896607 GCACGCCAAGCGCAAGACCGTCACCTCGCTCGACGTTGTCTACGCCCTTAAGCGCCAGGG 2896548
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
||||| | || ||||| || ||||| |||||
Sbjct 2896547 CCGTACCCTCTACGGTTTCGGTGGTTAAACTTCT 2896514
Score = 188 bits (208), Expect = 1e-43
Identities = 204/268 (76%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| |||||| || |||||||| || ||||||||||| |||||
Sbjct 1511238 GCCAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 1511180
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| ||||||||||| || ||||||||| |||||| || |||| || ||||
Sbjct 1511179 CCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 1511120
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | |||| | |||| ||||||| || || |||| ||| || || ||| || ||
Sbjct 1511119 CCGCGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACTGA 1511060
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||||||| | || | ||||| || | || || |||||
Sbjct 1511059 GCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCTCTCAAGCGACAAGG 1511000
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || ||||| || |||||
Sbjct 1510999 CCGCACCCTGTACGGTTTCGGTGGTTAA 1510972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075075654248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |