Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 199 6e-47 >seq1 Length=3101661 Score = 199 bits (220), Expect = 6e-47 Identities = 210/274 (77%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| |||||| || |||||||| || ||||||||||| ||||| Sbjct 2896786 GCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 2896728 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| ||||| |||||||| ||||||||| |||||| || |||| ||||||| Sbjct 2896727 CCGTCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAAGAGAC 2896668 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| ||| ||| |||| ||| || || || || || Sbjct 2896667 CCGTGGTGTCCTCAAGACCTTCCTCGAGAGCGTCATCCGTGACGCCGTCACATACACTGA 2896608 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||||| | || | ||||| || | || || || || Sbjct 2896607 GCACGCCAAGCGCAAGACCGTCACCTCGCTCGACGTTGTCTACGCCCTTAAGCGCCAGGG 2896548 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 ||||| | || ||||| || ||||| ||||| Sbjct 2896547 CCGTACCCTCTACGGTTTCGGTGGTTAAACTTCT 2896514 Score = 188 bits (208), Expect = 1e-43 Identities = 204/268 (76%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| |||||| || |||||||| || ||||||||||| ||||| Sbjct 1511238 GCCAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 1511180 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| ||||||||||| || ||||||||| |||||| || |||| || |||| Sbjct 1511179 CCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 1511120 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | |||| | |||| ||||||| || || |||| ||| || || ||| || || Sbjct 1511119 CCGCGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACTGA 1511060 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||||||| | || | ||||| || | || || ||||| Sbjct 1511059 GCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCTCTCAAGCGACAAGG 1511000 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || ||||| || ||||| Sbjct 1510999 CCGCACCCTGTACGGTTTCGGTGGTTAA 1510972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075075654248