Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq93 105 6e-18 seq48 84.2 2e-11 >seq2 Length=1714173 Score = 107 bits (118), Expect = 2e-18 Identities = 108/139 (78%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || || || | |||||||||||| || |||||||| || Sbjct 409013 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 408954 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 408953 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 408894 Query 131128 ATTCCTTCTTTGTC-GGTG 131145 || || || ||||| |||| Sbjct 408893 ATGCCCTCCTTGTCTGGTG 408875 >seq93 Length=1979483 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || ||||| || |||||||| ||| || |||||| ||||| ||||||||||| Sbjct 928592 GTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCCTCAAGCTGCTTGCCG 928651 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || |||||||||||||| ||||| || || ||||| ||| || ||| Sbjct 928652 GCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTC 928711 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 | | || | || |||| |||||||| || | ||| | ||| || ||||| Sbjct 928712 ACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 928764 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||| || | ||| | || |||||||| ||||||||||| ||| Sbjct 928279 CCACCACGCAGGCGCAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAT 928338 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| | || | |||||||| ||||| || Sbjct 928339 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGA 928398 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | || |||| ||||| | Sbjct 928399 ATGCCCTCCTTATCCTGGATCTTTGACTTGACGTTGTCAATGGTGTCGGACGACTCAACC 928458 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| |||| ||| || ||||| Sbjct 928459 TCGAGCGTAATGGTCTTGCCGGT 928481 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| || || | ||| |||||||| || |||||||| || Sbjct 927823 CCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 927882 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || |||||||| || || |||| | ||||||||||||||| ||| Sbjct 927883 AGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 927942 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||||| | || | || ||| | || || | Sbjct 927943 ATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGATTCCACC 928002 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| || || || || || || ||||| Sbjct 928003 TCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| || || | ||||||||||| || ||||||||||| Sbjct 928051 CCACCACGCAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAG 928110 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || || ||||| || ||| | || | ||||||||||| || || Sbjct 928111 AGAGTACGGCCGTCTTCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGA 928170 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||||| | || | |||||| | ||||| | Sbjct 928171 ATACCCTCCTTATCTTGAATCTTGGACTTGACGTTGTCAATAGTATCCGAAGACTCCACC 928230 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | || || ||||| |||||||| Sbjct 928231 TCTAGAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 928277 >seq48 Length=384450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || |||||||| || |||||||| ||| Sbjct 121952 CCACCACGGAGACGGAGAACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCGGAA 122011 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| || ||||| || ||| |||| | ||||||||||||||| || Sbjct 122012 AGGGTGCGACCATCCTCGAGTTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGA 122071 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 122072 ATGCCCTCCTTGTC 122085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011997578240