Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq93 116 3e-21
seq2 82.4 6e-11
>seq93
Length=1979483
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | ||||| || ||| |||| | || |||||| | | |
Sbjct 928049 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAGGTGGAATCGAGC 927990
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || ||||| |||||||||||||| || || || ||
Sbjct 927989 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAG 927930
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| || || ||| | || || ||| || |||| || ||||||
Sbjct 927929 CAGCGTCTCATCTTTGCTGGTAAGCAGCTTGAAGACGGCCGGACGCTCTCGGACTACAAC 927870
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || |||||| | || || ||
Sbjct 927869 ATCCAGAAGGAGTCCACCCTCCACTTGGT 927841
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || | || || || || || | |||| ||| | ||| | |||| |
Sbjct 928481 ACCGGCAAGACCATTACGCTCGAGGTTGAGTCGTCCGACACCATTGACAACGTCAAGTCA 928422
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || || |||||||| ||||| || ||||| || || || || || ||||| ||
Sbjct 928421 AAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATTTTCGCCGGAAAG 928362
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | |||||| ||||||| | ||||| ||||||||||| || || || || | |||
Sbjct 928361 CAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAGTCTACTCTGCAT 928302
Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446
| || ||||| |||| || |||
Sbjct 928301 CTCGTCTTGCGCCTGCGTGGTGGT 928278
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || || || || || ||||||| || ||||| | |
Sbjct 928277 ATGCAGATCTTCGTCAAGACGTTGACTGGAAAGACCATCACTCTAGAGGTGGAGTCTTCG 928218
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| | |||| || |||||||| |||||||||||||| || || ||
Sbjct 928217 GATACTATTGACAACGTCAAGTCCAAGATTCAAGATAAGGAGGGTATTCCCCCAGACCAG 928158
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || ||||| || || | || || ||| || |||| |||||||||
Sbjct 928157 CAGCGCCTGATTTTCGCCGGAAAGCAACTGGAAGACGGCCGTACTCTCTCTGATTACAAC 928098
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | || || || | || |||| || |||
Sbjct 928097 ATCCAGAAGGAGTCGACTCTTCACTTGGTGCTCCGTCTGCGTGGTGGT 928050
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| ||||| || || || |||| ||| | ||| || | ||
Sbjct 928764 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGAGC 928705
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || || || || || || || | || || ||||||||
Sbjct 928704 AAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCCGGCAAG 928645
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| |||||| | ||||| |||||||| || || ||||| ||
Sbjct 928644 CAGCTTGAGGATGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAATCAAC 928592
>seq2
Length=1714173
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
|||||||||||| ||||| || || || || ||||| || || |||||||| ||| | ||
Sbjct 408879 AGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGA 408938
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430
||| |||||| | || || |||||||| || || || || ||| | || || || |
Sbjct 408939 GGACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCT 408998
Query 22431 GCGATTGCGCGGAGG 22445
|| |||| || ||
Sbjct 408999 CCGTCTGCGTGGTGG 409013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727304300840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |