Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq93 116 3e-21 seq2 82.4 6e-11 >seq93 Length=1979483 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | ||||| || ||| |||| | || |||||| | | | Sbjct 928049 ATGCAAATCTTTGTCAAGACCCTTACCGGCAAGACGATCACGTTGGAGGTGGAATCGAGC 927990 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| |||||||||||||| || || || || Sbjct 927989 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAG 927930 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || ||| | || || ||| || |||| || |||||| Sbjct 927929 CAGCGTCTCATCTTTGCTGGTAAGCAGCTTGAAGACGGCCGGACGCTCTCGGACTACAAC 927870 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || || || || |||||| | || || || Sbjct 927869 ATCCAGAAGGAGTCCACCCTCCACTTGGT 927841 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || | || || || || || | |||| ||| | ||| | |||| | Sbjct 928481 ACCGGCAAGACCATTACGCTCGAGGTTGAGTCGTCCGACACCATTGACAACGTCAAGTCA 928422 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || |||||||| ||||| || ||||| || || || || || ||||| || Sbjct 928421 AAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATTTTCGCCGGAAAG 928362 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| ||||||| | ||||| ||||||||||| || || || || | ||| Sbjct 928361 CAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAGTCTACTCTGCAT 928302 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || ||||| |||| || ||| Sbjct 928301 CTCGTCTTGCGCCTGCGTGGTGGT 928278 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || ||||||| || ||||| | | Sbjct 928277 ATGCAGATCTTCGTCAAGACGTTGACTGGAAAGACCATCACTCTAGAGGTGGAGTCTTCG 928218 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || |||||||| |||||||||||||| || || || Sbjct 928217 GATACTATTGACAACGTCAAGTCCAAGATTCAAGATAAGGAGGGTATTCCCCCAGACCAG 928158 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||| || || | || || ||| || |||| ||||||||| Sbjct 928157 CAGCGCCTGATTTTCGCCGGAAAGCAACTGGAAGACGGCCGTACTCTCTCTGATTACAAC 928098 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || || | || |||| || ||| Sbjct 928097 ATCCAGAAGGAGTCGACTCTTCACTTGGTGCTCCGTCTGCGTGGTGGT 928050 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| || || || |||| ||| | ||| || | || Sbjct 928764 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGAGC 928705 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || || || || || || | || || |||||||| Sbjct 928704 AAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCCGGCAAG 928645 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| |||||| | ||||| |||||||| || || ||||| || Sbjct 928644 CAGCTTGAGGATGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAATCAAC 928592 >seq2 Length=1714173 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||| ||||| || || || || ||||| || || |||||||| ||| | || Sbjct 408879 AGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGA 408938 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 ||| |||||| | || || |||||||| || || || || ||| | || || || | Sbjct 408939 GGACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCT 408998 Query 22431 GCGATTGCGCGGAGG 22445 || |||| || || Sbjct 408999 CCGTCTGCGTGGTGG 409013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727304300840