Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq71 98.7 2e-15 seq48 86.0 1e-11 >seq71 Length=2329789 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || |||||||| || |||||||||||||||||||| | | || ||||| || || Sbjct 1846417 GTCGGCTCTCTGTCTGGAGGTTGGAAGATGAAGCTGGCTTTGGCCCGTGCCATGCTTATG 1846476 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 || || || || || || ||||| || || || |||||| |||| | ||||||| || Sbjct 1846477 CGCGCTGACGTGCTTCTTCTTGACGAACCCACTAACCACTTGGATGTCGCCAACGTCGCA 1846536 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGA---ATGTTTCTTCCCTCATTGTCTCTCAC 279872 ||||| | ||||| | |||| | | | |||| | | | || || || ||| Sbjct 1846537 TGGCTCGCAAAGTACCT--CAAGTC-GCATACTGATGTCACCAGCTTGATCGTTTCGCAC 1846593 Query 279873 GACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATC 279908 |||||||||||||| || | || ||| | | |||| Sbjct 1846594 GACTCTGGCTTCCTTGACGAAGTCTGCACAGACATC 1846629 >seq48 Length=384450 Score = 86.0 bits (94), Expect = 1e-11 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 279703 CTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTG-CC 279761 |||| || ||||| |||||||||||||| || || |||| ||| ||| | | | || Sbjct 12415 CTCTCTCTGGTGGATGGAAGATGAAGCTCGCGCTTGCTCGTGCC-GTCTTCGAGGAGCCC 12473 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 ||| | || |||||||| ||||| ||||||||| ||||| || |||||| ||||| Sbjct 12474 GATATTCTTCTGCTTGACGAGCCCACCAACCACTTGGACGTCAAGAACGTAAAGTGGCTC 12533 Query 279822 GTGTCCTACCTAACCA 279837 | | |||||| |||| Sbjct 12534 GAGGACTACCTCACCA 12549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835008994376