Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq93 170 4e-37 seq71 129 1e-24 seq46 104 4e-17 >seq93 Length=1979483 Score = 170 bits (188), Expect = 4e-37 Identities = 176/228 (77%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || |||||||| || |||||||| || || ||| Sbjct 927823 CCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 927882 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || ||||| | |||||| || || || ||||| | || ||||| || || Sbjct 927883 AGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 927942 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| |||||||| | ||||||| ||||||||||| ||| ||||| || Sbjct 927943 ATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTC-GCTCGATTCCAC 928001 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || || || || ||||||||||| || || ||||| Sbjct 928002 CTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || ||||| || |||||||| ||||| ||| Sbjct 928051 CCACCACGCAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAG 928110 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | ||||| |||||||| || || | || ||||| || ||| Sbjct 928111 AGAGTACGGCCGTCTTCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGA 928170 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| ||||||||||| | ||||||| || || || || | || || || Sbjct 928171 ATACCCTCCTTATCTTGAATCTTGGACTTGACGTTGTCAATAGTATCCGAAGACTCCACC 928230 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| ||||| || | ||||||||||| |||||||| Sbjct 928231 TCTAGAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 928277 Score = 122 bits (134), Expect = 2e-22 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | |||| ||| || || || || || |||||||| || ||||| Sbjct 928562 CCACCACGAAGGCGGAGGACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGAC 928621 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || | | || ||||| || || Sbjct 928622 AGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 928681 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||| || ||||||||||| | || || || Sbjct 928682 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCGACC 928741 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 928742 TCAAGGGTGATGGTCTTGCCGGTGA 928766 >seq71 Length=2329789 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 225410 TTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGAC 225469 || || |||||||| || | | ||| ||| |||||||||||||||||||||| || Sbjct 1846646 TTGTTTTCGTAATGGTAGATGTCTGTGCAGACTTCGTCAAGGAAGCCAGAGTCGTGCGAA 1846587 Query 225470 ACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTG 225529 || || | | | || | || | |||||||| | | ||||||||| |||||| Sbjct 1846586 ACGATCAAGCTGGTGACATCAGTATGCGACTTGAGGTACTTTGCGAGCCATGCGACGTTG 1846527 Query 225530 CTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATG 225589 ||| |||| |||||| || |||||||| ||||| || | |||||| || || ||| Sbjct 1846526 GCGACATCCAAGTGGTTAGTGGGTTCGTCAAGAAGAAGCACGTCAGCGCGCATAAGCATG 1846467 Query 225590 GCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGA 225638 || || | | || ||||||||| ||||| || || ||||| ||||||| Sbjct 1846466 GCACGGGCCAAAGCCAGCTTCATCTTCCAACCTCCAGACAGAGAGCCGA 1846418 Score = 84.2 bits (92), Expect = 4e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033 ||||||||||||||||| ||||| ||||| ||| | |||| || |||| | || | Sbjct 1847082 GGCATACCGCCACTGGAGATACTGATTGGGTGTCTTCTCCAAATGCATCTCGACGTGCTC 1847023 Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093 || ||| || || | ||| | || |||| |||||| |||||| |||| || Sbjct 1847022 GAGAGCGTGTTGCTTGATGTAACCAATACGCAAGTTGGGGTGCTTCTCGACAGTTCCTTC 1846963 Query 225094 AGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGG 225153 ||| | ||| ||||| || | |||||||||||| | || || ||||| |||| Sbjct 1846962 CTGCGGAATAGTCTCTCCGGTAAGCATCTTGATGAGCGTGGATTTACCAGCACCGTTGGC 1846903 Query 225154 GCCAATCACGCCAATCCGGGATGACA 225179 ||||| | | | | || ||||||| Sbjct 1846902 ACCAATGATGGCCACTCGAGATGACA 1846877 >seq46 Length=533260 Score = 104 bits (114), Expect = 4e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || || |||||||| || || || |||||||||||||| |||||| | Sbjct 197690 CATGACACCAGCTTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 197631 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || ||| ||||||||||||||||||||| |||| | ||||| || || Sbjct 197630 AAGCGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTGGTAGACCTTGGTGTTGCC 197571 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 || || | | || ||||| |||||||| |||||||||| ||| || | | ||| Sbjct 197570 CAGAGCGAGCAGCAAACGATCAGCAACGAACTCAATGTACTGGCACATGAGCTTGGCGTT 197511 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGC 10146 |||||| | || ||||| | ||||||| Sbjct 197510 CATGCCGAGCAGAGCACAGGGTAGCGCGTCGC 197479 Score = 87.8 bits (96), Expect = 3e-12 Identities = 121/169 (72%), Gaps = 8/169 (5%) Strand=Plus/Minus Query 10622 CAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAA 10681 ||||||||| | || |||||||| | | || || ||| |||||| ||| |||||| Sbjct 196951 CAGGTTCTCGTTGACGATGCCATCCGAGGCGGCGAAAAAGGCGAGGACGTGGGAGATGAA 196892 Query 10682 GTGGCGCTCATCATCGTTCAG----TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCT 10737 | |||||| ||||||||||| || || |||||| | ||||| | ||| | Sbjct 196891 GAAGCGCTCGTCATCGTTCAGGCGCTTGTT----CCAGTCGTGAAGATCCTTGGAGAGAT 196836 Query 10738 GGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 | ||| || |||||||||||| || |||||||||||||||| || Sbjct 196835 CAATCTCTTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTG 196787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921620833241920