Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq93 170 4e-37
seq71 129 1e-24
seq46 104 4e-17
>seq93
Length=1979483
Score = 170 bits (188), Expect = 4e-37
Identities = 176/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || |||||||| || |||||||| || || |||
Sbjct 927823 CCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAG 927882
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| || ||||| | |||||| || || || ||||| | || ||||| || ||
Sbjct 927883 AGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGG 927942
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|| || |||||||| |||||||| | ||||||| ||||||||||| ||| ||||| ||
Sbjct 927943 ATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTC-GCTCGATTCCAC 928001
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| || || || || ||||||||||| || || |||||
Sbjct 928002 CTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || || ||||| || |||||||| ||||| |||
Sbjct 928051 CCACCACGCAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAG 928110
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | ||||| |||||||| || || | || ||||| || |||
Sbjct 928111 AGAGTACGGCCGTCTTCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGA 928170
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| ||||||||||| | ||||||| || || || || | || || ||
Sbjct 928171 ATACCCTCCTTATCTTGAATCTTGGACTTGACGTTGTCAATAGTATCCGAAGACTCCACC 928230
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| ||||| || | ||||||||||| ||||||||
Sbjct 928231 TCTAGAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 928277
Score = 122 bits (134), Expect = 2e-22
Identities = 150/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | |||| ||| || || || || || |||||||| || |||||
Sbjct 928562 CCACCACGAAGGCGGAGGACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGAC 928621
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || | | || ||||| || ||
Sbjct 928622 AGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 928681
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| ||| || ||||||||||| | || || ||
Sbjct 928682 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCGACC 928741
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| || || ||||
Sbjct 928742 TCAAGGGTGATGGTCTTGCCGGTGA 928766
>seq71
Length=2329789
Score = 129 bits (142), Expect = 1e-24
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 225410 TTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGAC 225469
|| || |||||||| || | | ||| ||| |||||||||||||||||||||| ||
Sbjct 1846646 TTGTTTTCGTAATGGTAGATGTCTGTGCAGACTTCGTCAAGGAAGCCAGAGTCGTGCGAA 1846587
Query 225470 ACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTG 225529
|| || | | | || | || | |||||||| | | ||||||||| ||||||
Sbjct 1846586 ACGATCAAGCTGGTGACATCAGTATGCGACTTGAGGTACTTTGCGAGCCATGCGACGTTG 1846527
Query 225530 CTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATG 225589
||| |||| |||||| || |||||||| ||||| || | |||||| || || |||
Sbjct 1846526 GCGACATCCAAGTGGTTAGTGGGTTCGTCAAGAAGAAGCACGTCAGCGCGCATAAGCATG 1846467
Query 225590 GCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGA 225638
|| || | | || ||||||||| ||||| || || ||||| |||||||
Sbjct 1846466 GCACGGGCCAAAGCCAGCTTCATCTTCCAACCTCCAGACAGAGAGCCGA 1846418
Score = 84.2 bits (92), Expect = 4e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033
||||||||||||||||| ||||| ||||| ||| | |||| || |||| | || |
Sbjct 1847082 GGCATACCGCCACTGGAGATACTGATTGGGTGTCTTCTCCAAATGCATCTCGACGTGCTC 1847023
Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093
|| ||| || || | ||| | || |||| |||||| |||||| |||| ||
Sbjct 1847022 GAGAGCGTGTTGCTTGATGTAACCAATACGCAAGTTGGGGTGCTTCTCGACAGTTCCTTC 1846963
Query 225094 AGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGG 225153
||| | ||| ||||| || | |||||||||||| | || || ||||| ||||
Sbjct 1846962 CTGCGGAATAGTCTCTCCGGTAAGCATCTTGATGAGCGTGGATTTACCAGCACCGTTGGC 1846903
Query 225154 GCCAATCACGCCAATCCGGGATGACA 225179
||||| | | | | || |||||||
Sbjct 1846902 ACCAATGATGGCCACTCGAGATGACA 1846877
>seq46
Length=533260
Score = 104 bits (114), Expect = 4e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || || |||||||| || || || |||||||||||||| |||||| |
Sbjct 197690 CATGACACCAGCTTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 197631
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| || ||| ||||||||||||||||||||| |||| | ||||| || ||
Sbjct 197630 AAGCGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCGTGGTAGACCTTGGTGTTGCC 197571
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
|| || | | || ||||| |||||||| |||||||||| ||| || | | |||
Sbjct 197570 CAGAGCGAGCAGCAAACGATCAGCAACGAACTCAATGTACTGGCACATGAGCTTGGCGTT 197511
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGC 10146
|||||| | || ||||| | |||||||
Sbjct 197510 CATGCCGAGCAGAGCACAGGGTAGCGCGTCGC 197479
Score = 87.8 bits (96), Expect = 3e-12
Identities = 121/169 (72%), Gaps = 8/169 (5%)
Strand=Plus/Minus
Query 10622 CAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAA 10681
||||||||| | || |||||||| | | || || ||| |||||| ||| ||||||
Sbjct 196951 CAGGTTCTCGTTGACGATGCCATCCGAGGCGGCGAAAAAGGCGAGGACGTGGGAGATGAA 196892
Query 10682 GTGGCGCTCATCATCGTTCAG----TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCT 10737
| |||||| ||||||||||| || || |||||| | ||||| | ||| |
Sbjct 196891 GAAGCGCTCGTCATCGTTCAGGCGCTTGTT----CCAGTCGTGAAGATCCTTGGAGAGAT 196836
Query 10738 GGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786
| ||| || |||||||||||| || |||||||||||||||| ||
Sbjct 196835 CAATCTCTTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTG 196787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921620833241920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |