Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq49 277 3e-69 seq46 226 5e-54 >seq49 Length=2757401 Score = 277 bits (306), Expect = 3e-69 Identities = 916/1413 (65%), Gaps = 45/1413 (3%) Strand=Plus/Minus Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCAC 244098 |||||| ||| ||||||||||| | | || ||| || || ||| || || Sbjct 442780 CATGTTCTCGGACCACAGGCCCATGTCGACAAGGTCCTTGAGCAACCATGGGTTGACAAC 442721 Query 244099 CTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCT 244158 || ||||| |||| || || ||||| ||||| |||| | || ||||||| || Sbjct 442720 TTGGAACTCACCCGCGAGTACACGGCGAGAGTAGATGTTGGAGGTGTAGGGCTCGAAGCA 442661 Query 244159 CTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACT 244218 ||| |||| || || ||||| | || ||||| |||||||| | | ||||| Sbjct 442660 CTCATTGTTTCCGAGAATCTGGGAAGTCGAGGCAGTTGGCATGGGTGCGATAAGCAGCGA 442601 Query 244219 GTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGA 244278 ||| | || |||||| || | | ||| || ||| | || | | || | Sbjct 442600 GTTGCGGACACCGTGC-------TGAGCAATCTTGGCC--TTCAATTCTGCCCAGTCCCA 442550 Query 244279 GAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCT 244338 ||| || | ||| |||||||||| |||| || | |||| ||||| Sbjct 442549 GAGATCGGTAGGCGTGACATTCCACATGTCATACTGAAGAATACCCTGTGAAACGGGTGA 442490 Query 244339 GCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACA-GCTCTCGTCGAGGG 244397 |||||||||||| ||| | ||| || ||| | | ||| | || || | Sbjct 442489 TCCCTCGTAGGTCTCGTAAGTACCAAGCTCCTTGGCAATATCACATGAGGAAGTA-AGAG 442431 Query 244398 CGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TGCCGCAGGTG 244456 | || | ||||||||||||||||||| |||| | | ||||| ||||| | | Sbjct 442430 CAGCATGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCTGCCG-ACTCG 442372 Query 244457 AAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGT 244516 || || | || || | ||| | |||||||| || ||||| || || || |||||| Sbjct 442371 AATGGCAGGCGCAATGCGAGGAAAGCATCGGCCAGACCTTGCACACCCATACCAATGGGT 442312 Query 244517 CTGTGTCGCTTGTTGGAGCG-CATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575 | ||| || |||| ||| | || || | | |||||||| |||| | || || | Sbjct 442311 CGGTGACGGAAGTTGCTGCGGCGTGCCTCCTCG-ACGGGGTAGTGGTTGACATCAATGAT 442253 Query 244576 CTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTC 244635 |||||| | ||||||||||| | || ||| ||| ||| ||| ||||| |||| Sbjct 442252 CTTGTTCAAGTTGCGGGTGACAACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCAAACTC 442193 Query 244636 GTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTT 244695 | | || | || || ||||| || || | | |||||||| Sbjct 442192 G----------CCACGCTTGTAGTCG--ACAAAGGAAGGCAGAGCAAGGGAAGCCAGGTT 442145 Query 244696 GCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCA 244755 ||| || || ||||| || | ||||||| |||||||| ||||| | ||| || Sbjct 442144 GCAAACAGCAACCTCATCAGGAGCAGTGTACTCAACAATCTCTGTGCACAAGTTGGAGCT 442085 Query 244756 CTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCAT 244815 || ||||||| || || || ||| |||| |||||| || |||||||||||||| Sbjct 442084 GCGAATAGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCAT 442025 Query 244816 GAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTT 244875 ||||| || || ||| |||||| |||||| | | |||||| | | || Sbjct 442024 AAAGGGGTTACCAGTTTCGGTCTGGGCCTCGAGGATGGCATACCAGAGTTTCTGGGCGCG 441965 Query 244876 GACCGTCCTGCGAGCCTTGCCCTCTGC--CTCGTAGCGGGTGTACAGGGCCTCGAACTCG 244933 || ||| || ||||| ||||| |||||||| |||||| |||||||||||| Sbjct 441964 AACAGTCTCACGGCCCTTGT--TCTGCTTCTCGTAGCTCTCGTACAGTGCCTCGAACTCG 441907 Query 244934 GGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCG 244993 || |||| ||| | || || ||||| ||||||||||||| |||| ||||| Sbjct 441906 TCACCGTAGACGTCGGCGAGACCAGGGCATTCATTCGGGCACATGAGAGTCCATTCGCCA 441847 Query 244994 CCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTG 245053 || | ||| | || |||||| ||||| || ||||| || || | |||||| || | Sbjct 441846 TTCTCTTGGACACGCTTCATGAAAAGGTCTGGAATCCACAGAGCGTAGAAGAGATCACGA 441787 Query 245054 GTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACG 245113 | | ||| ||| ||| |||||| | || || | ||| ||||||| || || Sbjct 441786 GCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGACATCAGCG 441727 Query 245114 TGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACC 245173 ||||| ||||| | ||||| ||| | ||| || || ||||||||||| |||||||| | Sbjct 441726 TGCCATGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTGCCACCCTGGTCGA-- 441669 Query 245174 ATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 | | ||||| |||| | | || || |||| | | ||||| || || Sbjct 441668 --CGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGACGTTCC 441611 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA---GGTTGCTGATGGACATGCCTAG 245286 ||||||||| ||||| | ||| || | | || ||| | | || | ||| | Sbjct 441610 GTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGGACGTTG---AGGCCAAT 441554 Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346 ||||| ||| ||||||||| | ||| || |||||| ||||| ||||| || || Sbjct 441553 ACCGCCAGCGGTCTTGGAGATCAAGGCACATGTCTTGAGTGTGTCGTAGATGCCGTCAAT 441494 Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGA 245406 ||||||| |||||||| || || |||||||| |||| ||| || || | | | Sbjct 441493 GCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGATGGAGTACCTGC 441434 Query 245407 GTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 |||||| || || || ||||| || ||||| Sbjct 441433 GTTGAATAGCGTCGGTGAAGCGTGTGTGAAGTA 441401 >seq46 Length=533260 Score = 226 bits (250), Expect = 5e-54 Identities = 367/517 (71%), Gaps = 11/517 (2%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAAC 42691 ||||||||| |||||||| |||||||| || |||||| | | || | | || Sbjct 197166 CCCTGCATCCGCAAGAAGGCCGACTGGGCCCTGCGATGGATCTCT-GACAAGAACTCCAC 197224 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || | || ||||| || ||||| ||| ||| | || Sbjct 197225 TTTTGCCAGCCGTCTCGTCGCGTTCGCTGCTGTCGAAGGTATCTTTTTCAGCGGCTCGTT 197284 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACG 42810 ||| |||||||||||||||||| | | | ||| |||||| || || || ||||| |||| Sbjct 197285 CGCATCCATCTTCTGGCTCAAGAA-ACGTGGTCTGATGCCTGGTCTTACTTTCTCCAACG 197343 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | |||||| | || ||||| |||| | |||||||| ||||| || ||||| | Sbjct 197344 AGCTCATCTCTCGTGATGAGGGCATGCACACTGACTTTGCTTGCCTGCTCTTCTCT---C 197400 Query 42871 ACCTCAGGCACAAGCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 |||| ||| |||| | |||||| |||| ||||||||||| ||||| || || Sbjct 197401 TTCTCAA-CACTCGCCCCAGCAAGGAGGCCGTCCAAGCCATCATCACTGAGGCTGTCCAG 197459 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCC-CTGGTCGGCATGAACCACGA 42988 || ||| | |||||||||| | |||| ||| ||| | ||| ||||||||||| | | Sbjct 197460 ATTGAGCAAGAGTTCCTCAGCGACGCGCTACCC-TGTGCTCTGCTCGGCATGAACGCCAA 197518 Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAG 43048 ||||||||| ||||||| ||| ||| || || | | | ||| | |||| || Sbjct 197519 GCTCATGTGCCAGTACATTGAGTTCGTTGCTGATCGTTTGCTGCTCGCTCTGGGCAACAC 197578 Query 43049 CCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108 | ||||| || | | |||||| ||||| ||||||||||||||| | | ||||| Sbjct 197579 CAAGGTCTACCACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCGCTTGCTGGCAA 197638 Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||| ||||||||||| || | ||||||||| Sbjct 197639 GACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 197675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337594623360