Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq93 129 1e-24 seq46 87.8 4e-12 >seq93 Length=1979483 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | |||||| || |||||||| | || || || || ||| Sbjct 927859 TCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAG 927918 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || ||||| || || || ||||| || |||| || ||||| Sbjct 927919 ATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTG 927978 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||||||||| || || | |||||||||||| ||||| || |||||||| Sbjct 927979 TCGATGGTGTCGCTCGATTCCACCTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACA 928038 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 928039 AAGATTTGCAT 928049 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || | ||| || || |||||||| | ||| ||||| ||||| Sbjct 928087 TCCTTCTGGATGTTGTAATCAGAGAGAGTACGGCCGTCTTCCAGTTGCTTTCCGGCGAAA 928146 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| ||||| || |||||| || || || ||||| || || || | || ||| Sbjct 928147 ATCAGGCGCTGCTGG---TCTGGGGGAATACCCTCCTTATCTTGAATCTTGGACTTGACG 928203 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| ||| || || || || || ||||| ||||| || |||| |||||| Sbjct 928204 TTGTCAATAGTATCCGAAGACTCCACCTCTAGAGTGATGGTCTTTCCAGTCAACGTCTTG 928263 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 928264 ACGAAGATCTGCAT 928277 Score = 93.3 bits (102), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | | |||||||| | || || || || || || ||||||| Sbjct 928279 CCACCACGCAGGCGCAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAT 928338 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || ||||| ||||| ||||| ||||| ||| || ||| Sbjct 928339 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGA---TCCGGG 928395 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||||||||| || | || ||||| || || | ||| ||| || Sbjct 928396 GGAATGCCCTCCTTATCCTGGATCTTTGACTTGACGTTGTCAATGGTGTCGGACGACTCA 928455 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGT 288449 || |||||||| || ||||| ||||| Sbjct 928456 ACCTCGAGCGTAATGGTCTTGCCGGT 928481 >seq46 Length=533260 Score = 87.8 bits (96), Expect = 4e-12 Identities = 156/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176 |||||||| | | ||||| | || ||| || || |||| ||||| ||| | |||||| Sbjct 197467 AAGAGTTCCTCAGCGACGCGCTACCCTGTGCTCTGCTCGGCATGAACGCCAAGCTCATGT 197526 Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTG 269235 || || || || ||||| ||||||||| | || | || | || || | || || Sbjct 197527 GCCAGTACATTGAGTTCGTTGCTGATCGTTTGCTGCTCG-CTCTGGGCAACACCAAGGTC 197585 Query 269236 TACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAAC 269295 ||| | | | || ||||| | ||| ||||| || ||||| | || ||||| ||| Sbjct 197586 TACCACGCCACCAACCCCTTTGACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAAC 197645 Query 269296 TTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340 |||||||| |||||||| | ||||| || ||||||| ||| Sbjct 197646 TTCTTCGAGAAGCGTGTTGGTGACTACCAGAAAGCTGGTGTCATG 197690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652344452208