Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq93 118 1e-21 seq2 82.4 8e-11 >seq93 Length=1979483 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| | |||| ||||| || || || ||||||||||| | Sbjct 928050 ACCACCACGCAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGA 928109 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || ||||||| || ||||| ||||| |||| || ||||||||||| || || Sbjct 928110 GAGAGTACGGCCGTCTTCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGG 928169 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || ||||| || || ||| || || | ||||| | ||||| Sbjct 928170 AATACCCTCCTTATCTTGAATCTTGGACTTGACGTTGTCAATAGTATCCGAAGACTCCAC 928229 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| ||| | |||||| || ||||| || || ||||| || ||||| Sbjct 928230 CTCTAGAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 928277 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | ||||| | || | || || || || || |||||||| || | Sbjct 927822 ACCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 927881 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || |||||||||||||||| || ||| | ||||| ||||||||||| || || Sbjct 927882 GAGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGG 927941 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || | | ||||| Sbjct 927942 GATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGATTCCAC 928001 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||||| | || || || || |||||||| Sbjct 928002 CTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || || || || ||||||||||| || | | |||||| | || ||| Sbjct 928297 ACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCA 928356 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 |||||||| ||||| |||| || |||||||| || || ||||| || || || || || Sbjct 928357 AGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGG 928416 Query 64355 ATTTTTTGCTTTAC 64368 || ||| ||| || Sbjct 928417 ATCTTTGACTTGAC 928430 >seq2 Length=1714173 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | | ||||| |||| || |||||||||||| Sbjct 408983 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCG 408924 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || | ||||| ||||||||||| || ||||| || || || ||| || Sbjct 408923 GCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTGGT 408876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643950603840