Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq49 286 3e-72 >seq49 Length=2757401 Score = 286 bits (316), Expect = 3e-72 Identities = 607/901 (67%), Gaps = 4/901 (0%) Strand=Plus/Plus Query 93732 CTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACC 93791 |||||| || |||||| || ||||||||| || ||||||| |||| | ||||| || Sbjct 441253 CTTCAAGACACTGGAGCGCTCATACCTCCTCCGCATCGATGGCAAGGTTGCTGAGCGCCC 441312 Query 93792 GCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCGAATGTTTT 93851 || || |||| ||||| ||||| |||| || ||||| | || || ||| | | Sbjct 441313 ACAACACATGCTCATGCGTGTCGCTGTCGGTATCCACGGTGAGGATATCGAGAAGGCCAT 441372 Query 93852 GCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACCCTGTTCAA 93911 | | | | ||||| | ||| | || || | ||||| || ||||| Sbjct 441373 TGAGACCTACGACTACATGTCACAAAAGTACTTCACACACGCTTCACCGACGCTATTCAA 441432 Query 93912 CGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAAGGCCGACT 93970 ||| || || || || ||||||||||| || ||||| || ||| | |||| ||| Sbjct 441433 CGCAGGTACTCCATCACCTCAGATGTCTTCCTGCTTCCTCATCGAC-ATGAAGGAGGACA 441491 Query 93971 CCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGG 94030 ||| ||| || | ||||| |||||| ||||| ||||| || ||| || | Sbjct 441492 GCATTGACGGCATCTACGACACACTCAAGACATGTGCCTTGATCTCCAAGACCGCTGGCG 441551 Query 94031 GAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATG 94090 | || || ||| |||||| | ||||||| || || ||||| |||| ||||| | Sbjct 441552 GTATTGGCCTCAACGTCCACCGAATCCGTGCCACCGGCTCATACATTGGCGGCACCAACG 441611 Query 94091 GCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGG 94150 | || || ||||| ||| | ||||||||||| || | ||||||| |||| |||||||| | Sbjct 441612 GAACGTCAAACGGTCTCATTCCTATGCTCCGTGTATACAACAACACGGCTCGCTACGTCG 441671 Query 94151 ACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGG 94210 |||||||||| | | | |||| | || || |||| || ||||| |||||||| | Sbjct 441672 ACCAGGGTGGCAACAAGCGTCCGGGTGCCTTTGCTATCTACCTTGAGCCATGGCACGCTG 441731 Query 94211 ACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAG 94270 | || | ||| ||||||| || |||||||||||||| || || | || | | Sbjct 441732 ATGTCTTTGGCTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCTCGTG 441791 Query 94271 ACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCG 94330 | |||||||||||||| ||| | ||||||||||| ||||| || ||| | | || || Sbjct 441792 ATCTCTTCTACGCTCTGTGGATTCCAGACCTTTTCATGAAGCGTGTCCAAGAGAATGGCG 441851 Query 94331 CCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCG-T 94389 |||| ||| | || || |||||||| || || || ||||||| | || | || Sbjct 441852 AATGGACTCTCATGTGCCCGAATGAATGCCCTGGTCTCGCCGACGTCTACGG-TGACGAG 441910 Query 94390 TTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCT 94449 || || | |||| | | ||||| |||| ||||| | | || | | || Sbjct 441911 TTCGAGGCACTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCGTGAGACTGTTCGCGCC 441970 Query 94450 AGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTG 94509 ||| || ||| || ||| | || | ||| || || |||| |||| || | Sbjct 441971 CAGAAACTCTGGTATGCCATCCTCGAGGCCCAGACCGAAACTGGTAACCCCTTTATGCTC 442030 Query 94510 TTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCG 94569 | |||||| || |||| |||| ||||||| || || | || || ||||| Sbjct 442031 TACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACTTGGGCACTATTCGCAGCTCC 442090 Query 94570 AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTG 94629 || ||||||| |||||||| ||||| ||| |||| || ||| ||||||| || |||||| Sbjct 442091 AACTTGTGCACAGAGATTGTTGAGTACACTGCTCCTGATGAGGTTGCTGTTTGCAACCTG 442150 Query 94630 G 94630 | Sbjct 442151 G 442151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722358970560