Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq93 143 3e-29 seq2 102 9e-17 seq48 96.9 4e-15 >seq93 Length=1979483 Score = 143 bits (158), Expect = 3e-29 Identities = 149/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || || || |||| || |||||||| || || || Sbjct 927858 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAA 927917 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||||| ||| Sbjct 927918 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTCGACTTGA-CGT 927976 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||||||||||||| |||| |||||| || ||||| || || || || | Sbjct 927977 TGTCGATGGTGTCGCTCGATTCCACCTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGA 928036 Query 46581 CAAAGATTTGCAT 46593 ||||||||||||| Sbjct 928037 CAAAGATTTGCAT 928049 Score = 127 bits (140), Expect = 2e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| || ||||||| ||| |||||| || || |||||||||||||| ||||| | Sbjct 928291 CGCAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCA 928350 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || |||||||| |||||||| |||| ||||||||| || | || | || |||||| Sbjct 928351 TCCTCAAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTA 928410 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| ||||| ||| | | | |||||| ||| || || || | ||| || Sbjct 928411 TCCTGGATCTTTGACTTGA-CGTTGTCAATGGTGTCGGACGACTCAACCTCGAGCGTAAT 928469 Query 46558 GGTTTTGCCCGT 46569 ||| ||||| || Sbjct 928470 GGTCTTGCCGGT 928481 Score = 122 bits (134), Expect = 1e-22 Identities = 127/167 (76%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| || ||||| | || || ||||||||||||||||| Sbjct 928598 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAG 928657 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||||||||||||||| | || | || |||||||||| |||||| |||| | | Sbjct 928658 ATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTCACATTG 928717 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | |||||| || || || || | |||||||| ||||| || Sbjct 928718 TCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 928764 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || ||||| || |||| || || ||||| |||||||| Sbjct 928086 CTCCTTCTGGATGTTGTAATCAGAGAGAGTACGGCCGTCTTCCAGTTGCTTTCCGGCGAA 928145 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | | |||||| || ||||| ||||| ||| Sbjct 928146 AATCAGGCGCTGCTGGTCTGGGGGAATACCCTCCTTATCTTGAATCTTGGACTTGA-CGT 928204 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || || || ||||| || | |||||||| || || |||| ||| || | Sbjct 928205 TGTCAATAGTATCCGAAGACTCCACCTCTAGAGTGATGGTCTTTCCAGTCAACGTCTTGA 928264 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 928265 CGAAGATCTGCAT 928277 >seq2 Length=1714173 Score = 102 bits (112), Expect = 9e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || |||||||| |||| |||||||||||||||||||| Sbjct 408978 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 408919 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || | ||||||||||| | || | || ||||||||| Sbjct 408918 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 408880 >seq48 Length=384450 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| || | ||| |||||| ||||| ||||||||||| || ||||| | || ||| Sbjct 121970 ACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCG 122029 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| || ||||| || | ||||||||||| | || | || |||||||||| | Sbjct 122030 AGTTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 122089 Query 46505 ATCTTCTTCTTGA 46517 ||||| ||||| Sbjct 122090 ATCTTGGACTTGA 122102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237439094720