Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq93 120 7e-22 seq49 105 1e-17 seq2 89.7 1e-12 >seq93 Length=1979483 Score = 120 bits (132), Expect = 7e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || || || ||||| ||||| || ||||| ||||| |||| || || | ||||| Sbjct 928293 CAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATC 928352 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || |||||||| || ||||| || || || || || || || |||||||| || || || Sbjct 928353 CTCAAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATC 928412 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || || ||| ||||||||| ||||||||||| || || || || || |||| || Sbjct 928413 CTGGATCTTTGACTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCGAGCGTAATGGT 928472 Query 195108 CTTTCCTGT 195116 ||| || || Sbjct 928473 CTTGCCGGT 928481 Score = 113 bits (124), Expect = 1e-19 Identities = 150/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || || || ||||| || | || || | || ||||| ||||| Sbjct 927846 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGGCCGTCTTCAAGCTG 927905 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || ||||| || || || ||||| || || || || || ||||| ||||| || Sbjct 927906 CTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTT 927965 Query 195057 TTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCC 195113 ||||||||| || |||||||| ||| |||||| || | || | |||||| || Sbjct 927966 CGACTTGACGTTGTCGATGGTGTCGCTCGA---TTCCACCTCCAACGTGATCGTCTTGCC 928022 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || | |||||| Sbjct 928023 GGTAAGGGTCTTGACAAAGATTTGCAT 928049 >seq49 Length=2757401 Score = 105 bits (116), Expect = 1e-17 Identities = 194/282 (69%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 |||||||| | |||| | | || |||||||||||| | || |||| ||||| || ||| Sbjct 441797 TTCTACGCTCTGTGGATTCCAGACCTTTTCATGAAGCGTGTCCAAGAGAATGGCGAATGG 441856 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | || | || || |||||| ||||| || | || || || ||| |||||||||| Sbjct 441857 ACTCTCATGTGCCCGAATGAATGCCCTGGTCTCGCCGACGTCTACGGTGACGAGTTCGAG 441916 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAG-GGAAGAGCC---AAAAAGGTCGTGAAGGCCCA 160764 | || || || || ||||| || || ||| ||| | | | ||| ||||| Sbjct 441917 GCACTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCGTGAGACTGTTCG----CGCCCA 441972 Query 160765 AGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATA 160824 |||| ||| || |||||| | ||||| ||| |||| |||||||| || Sbjct 441973 GAAACTCTGGTATGCCATCCTCGAGGCCCAGACCGAAACTGGTAACCCCTTTATGCTCTA 442032 Query 160825 CAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866 ||||||||| | |||||||| |||||||||||||| || Sbjct 442033 CAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACTTGGG 442074 >seq2 Length=1714173 Score = 89.7 bits (98), Expect = 1e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||| || | |||||| | || || |||||||| Sbjct 408990 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTG 408931 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 ||| || |||||||| || || || ||||| || |||||||| || |||||| Sbjct 408930 CTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCT 408879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479666728312