Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq93 120 7e-22
seq49 105 1e-17
seq2 89.7 1e-12
>seq93
Length=1979483
Score = 120 bits (132), Expect = 7e-22
Identities = 140/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||| || || || ||||| ||||| || ||||| ||||| |||| || || | |||||
Sbjct 928293 CAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATC 928352
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|| |||||||| || ||||| || || || || || || || |||||||| || || ||
Sbjct 928353 CTCAAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATC 928412
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
|| || ||| ||||||||| ||||||||||| || || || || || |||| ||
Sbjct 928413 CTGGATCTTTGACTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCGAGCGTAATGGT 928472
Query 195108 CTTTCCTGT 195116
||| || ||
Sbjct 928473 CTTGCCGGT 928481
Score = 113 bits (124), Expect = 1e-19
Identities = 150/207 (72%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| || | || || | || ||||| |||||
Sbjct 927846 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGGCCGTCTTCAAGCTG 927905
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| || ||||| || || || ||||| || || || || || ||||| ||||| ||
Sbjct 927906 CTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTT 927965
Query 195057 TTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCC 195113
||||||||| || |||||||| ||| |||||| || | || | |||||| ||
Sbjct 927966 CGACTTGACGTTGTCGATGGTGTCGCTCGA---TTCCACCTCCAACGTGATCGTCTTGCC 928022
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || || | ||||||
Sbjct 928023 GGTAAGGGTCTTGACAAAGATTTGCAT 928049
>seq49
Length=2757401
Score = 105 bits (116), Expect = 1e-17
Identities = 194/282 (69%), Gaps = 8/282 (3%)
Strand=Plus/Plus
Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648
|||||||| | |||| | | || |||||||||||| | || |||| ||||| || |||
Sbjct 441797 TTCTACGCTCTGTGGATTCCAGACCTTTTCATGAAGCGTGTCCAAGAGAATGGCGAATGG 441856
Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708
| || | || || |||||| ||||| || | || || || ||| ||||||||||
Sbjct 441857 ACTCTCATGTGCCCGAATGAATGCCCTGGTCTCGCCGACGTCTACGGTGACGAGTTCGAG 441916
Query 160709 ACTCTTTATGAAAGATACGAAAAAGAG-GGAAGAGCC---AAAAAGGTCGTGAAGGCCCA 160764
| || || || || ||||| || || ||| ||| | | | ||| |||||
Sbjct 441917 GCACTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCGTGAGACTGTTCG----CGCCCA 441972
Query 160765 AGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATA 160824
|||| ||| || |||||| | ||||| ||| |||| |||||||| ||
Sbjct 441973 GAAACTCTGGTATGCCATCCTCGAGGCCCAGACCGAAACTGGTAACCCCTTTATGCTCTA 442032
Query 160825 CAAGGATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGG 160866
||||||||| | |||||||| |||||||||||||| ||
Sbjct 442033 CAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACTTGGG 442074
>seq2
Length=1714173
Score = 89.7 bits (98), Expect = 1e-12
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||| || | |||||| | || || ||||||||
Sbjct 408990 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTG 408931
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
||| || |||||||| || || || ||||| || |||||||| || ||||||
Sbjct 408930 CTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCT 408879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109479666728312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |