Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq93 87.8 1e-11 >seq93 Length=1979483 Score = 87.8 bits (96), Expect = 1e-11 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| ||||| || || || |||||||||||||| || || || |||||||| | || Sbjct 312781 ACTGTCCCAGCCTACTTCAACGACTCACAACGTCAGGCCACCAAGGATGCTGGTCTCATC 312722 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || || || || || ||||| ||||| || || || || ||||| |||| || || Sbjct 312721 GCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCTGCCATTGCCTACGGT 312662 Query 550529 CTTGATAA 550536 || || || Sbjct 312661 CTCGACAA 312654 Score = 86.0 bits (94), Expect = 5e-11 Identities = 155/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| || | ||||| || ||| | ||| || |||||||||| ||||| | Sbjct 928060 AGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGG--ATGTTGTAATCAGAGAGAGTAC 928117 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 ||||| ||||| |||||||| ||||| || | ||||| || || ||||| || | Sbjct 928118 GGCCGTCTTCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATACCCT 928177 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433 | ||||||||||| || || || ||||| ||||| | || | || || ||| Sbjct 928178 CCTTATCTTGAATCTTGGACTTGACGTTGTCAATAGTATCCG-AAGACTCCACCTCTAGA 928236 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | || || ||||| | || || ||||| || |||||| Sbjct 928237 GTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCATA 928278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029288807706640