Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq93 87.8 1e-11
>seq93
Length=1979483
Score = 87.8 bits (96), Expect = 1e-11
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| ||||| || || || |||||||||||||| || || || |||||||| | ||
Sbjct 312781 ACTGTCCCAGCCTACTTCAACGACTCACAACGTCAGGCCACCAAGGATGCTGGTCTCATC 312722
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
|| || || || || || ||||| ||||| || || || || ||||| |||| || ||
Sbjct 312721 GCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCTGCCATTGCCTACGGT 312662
Query 550529 CTTGATAA 550536
|| || ||
Sbjct 312661 CTCGACAA 312654
Score = 86.0 bits (94), Expect = 5e-11
Identities = 155/222 (70%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314
|||||||| || | ||||| || ||| | ||| || |||||||||| ||||| |
Sbjct 928060 AGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGG--ATGTTGTAATCAGAGAGAGTAC 928117
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
||||| ||||| |||||||| ||||| || | ||||| || || ||||| || |
Sbjct 928118 GGCCGTCTTCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATACCCT 928177
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGA 563433
| ||||||||||| || || || ||||| ||||| | || | || || |||
Sbjct 928178 CCTTATCTTGAATCTTGGACTTGACGTTGTCAATAGTATCCG-AAGACTCCACCTCTAGA 928236
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| | || || ||||| | || || ||||| || ||||||
Sbjct 928237 GTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCATA 928278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029288807706640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |