Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq35 123 2e-23 >seq35 Length=1298611 Score = 123 bits (136), Expect = 2e-23 Identities = 418/646 (65%), Gaps = 49/646 (8%) Strand=Plus/Minus Query 29779 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 29838 ||||| | ||| ||||| || |||| || ||||| || ||||||||||| ||||| Sbjct 939635 GGCTCACGCTCCAGCTGCACTTTGAGCGCATCGACGTGGTCGAGGTAGACGTGGGCGTCG 939576 Query 29839 CCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 29898 |||| |||||| ||| |||||| || || || ||||||| ||||| ||| Sbjct 939575 CCCATGGTGTGTGTAAAAGTGCCCGGTGTCAGGTCGCACACATGAGCCAGCATGTGGGTG 939516 Query 29899 AGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGG 29958 || || | || || ||||| || || || |||||||||||||| | ||| | |||| Sbjct 939515 AGTAGCGCATACGACGCAATGTTGAACGGCACGCCGAGCCCCATGTCGCACGAGCGCTGG 939456 Query 29959 TA---GAGCTGACACGAGA---------------GCTCTCC------GTCGC-------- 29986 || |||| | ||| |||| || || || Sbjct 939455 TACAAGAGCGAGTGCAAGACGCCCCTGGGGCGCTGCTCGCCCTGCTTGTGGCCTGGAAAA 939396 Query 29987 -TCACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 30042 | ||||||||||| | ||||| ||||| || || || ||||| | || Sbjct 939395 CTGACGTAAAACTGGGCAAACATG---TGGCAAGGCGGCAGGGCCATTTTCTTGATATCG 939339 Query 30043 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30102 |||||||| |||| | |||||||||| ||| | || |||||| ||| ||| Sbjct 939338 GCCGGGTTCCACGCGCTGAGAATGATGCGCCGGTCGTACGGCTTGTTCTTGAGCTTGTCG 939279 Query 30103 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT-GTA 30161 | | | | || || || || ||| || | |||||| | | | || || | ||| Sbjct 939278 ATGATCTCTGCGAGTTGGTCGACGCCCTCGCCTGTGTAGTC-GTGCGCGTGGCCCTTGTA 939220 Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221 ||||| || || |||| ||| ||||| ||||| || || ||||| || || ||||| Sbjct 939219 TTCTGCGCCAAAGTGCCGCCATTGGAAGCCGTAGACGGGGCCCAGCTCGCCTTCTTCGTA 939160 Query 30222 GTGCTCGA-AGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279 |||| || || ||| | |||| | | || | | |||||| ||||||||||||| Sbjct 939159 GTGC--GATAGTCCCACGCTGTCGAGGTACTCGCGGCTGCCGTTGCCGTCCCAGATCTTG 939102 Query 30280 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30339 | || |||||||| ||| || |||| ||| |||||||| || ||||| Sbjct 939101 ATGCCTGCGTCGGAGAGGGACTTGCTGTGTGTGCTGCCTGCAACGAACCAGAGTAGCTCG 939042 Query 30340 TCCACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGG 30383 | | |||||| | || ||||| | |||||| ||||||||||| Sbjct 939041 CCAATGACGGCA--CGAAGGAAGACGCGCTTGGTGGTGAGGAGGGG 938998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616922716328