Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq35 123 2e-23
>seq35
Length=1298611
Score = 123 bits (136), Expect = 2e-23
Identities = 418/646 (65%), Gaps = 49/646 (8%)
Strand=Plus/Minus
Query 29779 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 29838
||||| | ||| ||||| || |||| || ||||| || ||||||||||| |||||
Sbjct 939635 GGCTCACGCTCCAGCTGCACTTTGAGCGCATCGACGTGGTCGAGGTAGACGTGGGCGTCG 939576
Query 29839 CCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 29898
|||| |||||| ||| |||||| || || || ||||||| ||||| |||
Sbjct 939575 CCCATGGTGTGTGTAAAAGTGCCCGGTGTCAGGTCGCACACATGAGCCAGCATGTGGGTG 939516
Query 29899 AGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGG 29958
|| || | || || ||||| || || || |||||||||||||| | ||| | ||||
Sbjct 939515 AGTAGCGCATACGACGCAATGTTGAACGGCACGCCGAGCCCCATGTCGCACGAGCGCTGG 939456
Query 29959 TA---GAGCTGACACGAGA---------------GCTCTCC------GTCGC-------- 29986
|| |||| | ||| |||| || || ||
Sbjct 939455 TACAAGAGCGAGTGCAAGACGCCCCTGGGGCGCTGCTCGCCCTGCTTGTGGCCTGGAAAA 939396
Query 29987 -TCACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 30042
| ||||||||||| | ||||| ||||| || || || ||||| | ||
Sbjct 939395 CTGACGTAAAACTGGGCAAACATG---TGGCAAGGCGGCAGGGCCATTTTCTTGATATCG 939339
Query 30043 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30102
|||||||| |||| | |||||||||| ||| | || |||||| ||| |||
Sbjct 939338 GCCGGGTTCCACGCGCTGAGAATGATGCGCCGGTCGTACGGCTTGTTCTTGAGCTTGTCG 939279
Query 30103 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT-GTA 30161
| | | | || || || || ||| || | |||||| | | | || || | |||
Sbjct 939278 ATGATCTCTGCGAGTTGGTCGACGCCCTCGCCTGTGTAGTC-GTGCGCGTGGCCCTTGTA 939220
Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221
||||| || || |||| ||| ||||| ||||| || || ||||| || || |||||
Sbjct 939219 TTCTGCGCCAAAGTGCCGCCATTGGAAGCCGTAGACGGGGCCCAGCTCGCCTTCTTCGTA 939160
Query 30222 GTGCTCGA-AGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279
|||| || || ||| | |||| | | || | | |||||| |||||||||||||
Sbjct 939159 GTGC--GATAGTCCCACGCTGTCGAGGTACTCGCGGCTGCCGTTGCCGTCCCAGATCTTG 939102
Query 30280 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30339
| || |||||||| ||| || |||| ||| |||||||| || |||||
Sbjct 939101 ATGCCTGCGTCGGAGAGGGACTTGCTGTGTGTGCTGCCTGCAACGAACCAGAGTAGCTCG 939042
Query 30340 TCCACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGG 30383
| | |||||| | || ||||| | |||||| |||||||||||
Sbjct 939041 CCAATGACGGCA--CGAAGGAAGACGCGCTTGGTGGTGAGGAGGGG 938998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408616922716328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |