Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq49 338 1e-87 seq46 176 8e-39 >seq49 Length=2757401 Score = 338 bits (374), Expect = 1e-87 Identities = 1112/1703 (65%), Gaps = 78/1703 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || || || | |||| ||| ||||||| |||| || || ||||||||||| ||||| Sbjct 443070 ACTGTGAATTGAATTGGAGCAGAAGCAGCCATGGTACGGAGGTAGTACATGCCCGTCTTG 443011 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| ||| ||| | |||||| | |||| |||| | | | Sbjct 443010 AGACCAAGCTT---CCATCCGGCAAAGTGCATGGAAGTGA---TCTTGCCCATGGT---- 442961 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 ||| |||| || || | |||||| ||||| ||| || ||||| | | Sbjct 442960 TGGC--TCCTT------CATGTGGATGTTCAGTGACTGTGACTGATCAATGAAGGCACCA 442909 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | |||||| ||||| | || || || || |||| ||||| || |||||| ||| Sbjct 442908 CGGTCAGCAGCCATCTGAATAATGGTTCGTTGCGAGATTTCCCAAACAGTCTTGTAGAGG 442849 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAG--ACCCCCTGTGTATGGTCA 212847 ||| ||||| |||| | |||||| | |||| | ||| ||| ||| Sbjct 442848 GTCTTGGTTTCCTCAGGGATGTTGGGGATTCT-TGCAATGGAACCGCCT--------TCA 442798 Query 212848 GC--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGAC 212899 || || | ||| ||||| |||| ||| |||||| || | ||| ||||| Sbjct 442797 GCGATG-ATGCGGTTCTTCATGTTCTCGGACCACAGGCCCATGTCGACAAGGTCCTTGAG 442739 Query 212900 CAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGA 212959 || |||||||| | ||||| ||||| | ||| || | | ||| | ||| || Sbjct 442738 CAACCATGGGTTGACAACTTGGAACTCACCCGCGAGTACACGGCGAGAGTAGATGTTGGA 442679 Query 212960 AGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCAT 213019 ||||||||||||| || ||| ||||| || |||||||| | ||| ||| || ||||| Sbjct 442678 GGTGTAGGGCTCGAAGCACTCATTGTTTCCGAGAATCTGGGAAGTCGAGGCAGTTGGCAT 442619 Query 213020 GGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGC 213079 ||| || | || || ||| | || ||||||| | || | | | ||||| Sbjct 442618 GGGTGCGATAAGCAGCGAGTTGCGGACACCGTGCTGAGCAATCTTGGCCTTCAATTCTGC 442559 Query 213080 CCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGAT 213139 ||||||||| ||| ||| || | || |||||||||||| |||| | || Sbjct 442558 CCAGTCCCA-----GAGATCGGTAGGCG----TGACATTCCACATGTCATACTGAAGAAT 442508 Query 213140 GCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTC 213199 || | ||||| |||| ||| | ||| | ||| |||||||||| | || Sbjct 442507 ACCCTGTGAAACGGGTGATCCCTCGTAGGTCTCGTAAGTACCAAGCTCCTTGGCAATATC 442448 Query 213200 GCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTT 213259 || || | || ||||| | ||||||||| || || |||| ||||||||||||| Sbjct 442447 ACATGAGGAAGTAAGAGCAGCATGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTT 442388 Query 213260 GGCCTCTGGGGACGTGAAGGGCA-TCATCATGCGTTGGAACACATCAGCCAGCCCCTGGA 213318 |||||||| ||| ||| |||| | ||||| |||| |||| ||||| || || | Sbjct 442387 GGCCTCTGCCGACTCGAATGGCAGGCGCAATGCG-AGGAAAGCATCGGCCAGACCTTGCA 442329 Query 213319 CCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAG-CACTCCTCCAAGGGGTAA 213377 | || || || ||||||| ||| | | ||| | || | |||||| | |||||| Sbjct 442328 CACCCATACCAATGGGTCGGTGACGGAAGTT-GCTGCGGCGTGCCTCCTCGACGGGGTAG 442270 Query 213378 AAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGG 213437 |||| || ||||||||||| | |||||||||| | || | |||||| | | || Sbjct 442269 TGGTTGACATCAATGATCTTGTTCAAGTTGCGGGTGACAACCTGGGTGACCTCGTGGAGC 442210 Query 213438 TACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCC 213497 | || | | ||| || | | || | ||||| |||||| || | | ||| Sbjct 442209 TTCTGGAAGTCAAACTCGCCACGCTTGTAGTCGACAAAGGAAGGCAGAGCAAGGGAAGCC 442150 Query 213498 AGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557 ||||||||||| || ||||| | || | |||||||| | ||||| ||||||| |||| Sbjct 442149 AGGTTGCAAACAGCAACCTCATCAGGAGCAGTGTACTCAACAATCTCTGTGCACAAGTTG 442090 Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAG 213617 || || || ||||||| ||||| ||||| ||| |||| || |||||||||| Sbjct 442089 GAGCTGCGAATAGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAG 442030 Query 213618 AGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACC 213675 ||||| ||||| || || || ||||| | | || | |||| ||||| || | Sbjct 442029 AGCATAAAGGGGTTACCAGTTTCGGTCTGGGCCTCGAGGA--TGGCATACCAGA-GTTTC 441973 Query 213676 TGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC--CTCGTACTGTTCGTAGAGCTC 213733 ||| | || || | || || || || | || |||||| ||||| || | Sbjct 441972 TGGGCGCGAACA---GTCTCACGGC-CCTTGTTCTGCTTCTCGTAGCTCTCGTACAGTGC 441917 Query 213734 GTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACA-GGATGCGGGACACATGAGGC 213792 | ||| |||| || |||| | | || || || || || |||| |||||||| Sbjct 441916 CTCGAACTCGTCACCGTAGACGTCGGCGAGACCAGGGCATTCATTCGGG-CACATGAGAG 441858 Query 213793 TCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852 |||| || || | ||| ||| | || |||||| ||||| || | |||||| ||| || Sbjct 441857 TCCATTCGCCATTCTCTTGGACACGCTTCATGAAAAGGTCTGGAATCCACAGAGCGTAGA 441798 Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912 | || || | | | ||| ||| || ||| ||||| || || || ||| ||| Sbjct 441797 AGAGATCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAA 441738 Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGC 213969 ||| || |||||||| ||||| | |||||| |||||||| |||| || | ||||| | Sbjct 441737 AGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTGCCAC 441678 Query 213970 CCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG 214029 ||||||| || | ||| ||||| | | || || | || | || ||||| | Sbjct 441677 CCTGGTCGACGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTG 441618 Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGA 214086 || ||||||||| || | || || ||||||| ||| | | ||| | | | || Sbjct 441617 ACGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGG---ACGTTGA 441561 Query 214087 GCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGC 214146 | || || || || ||| ||||||||||| ||| || | | | || || ||||| Sbjct 441560 GGCCAATACCGCCAGCGGTCTTGGAGATCAAGGCACATGTCTTGAGTGTGTCGTAGATGC 441501 Query 214147 CGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTG-GGGCCTGGAC 214205 || | |||||||| || | | || | | ||||||| || | ||| || |||| Sbjct 441500 CGTCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGATGGA- 441442 Query 214206 GAGCCAGAGTTGAAAAGCGTGGG 214228 | || | |||||| ||||| || Sbjct 441441 GTACCTGCGTTGAATAGCGTCGG 441419 >seq46 Length=533260 Score = 176 bits (194), Expect = 8e-39 Identities = 354/518 (68%), Gaps = 13/518 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 197675 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTC 197616 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| |||||||||| | || || ||| || ||||| ||||| Sbjct 197615 CATGAAGTCAAAGGGGTTGGTGGCGTGGTAGACCTTGGTGTTGCCCAGAGCGAGCAGCAA 197556 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 |||| || ||| |||| ||||| | ||||||| || ||||||||| | || | Sbjct 197555 ACGATCAGCAACGAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGAG- 197497 Query 48019 CAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| ||| | || | |||| ||||| | ||| ||||| || || || | || Sbjct 197496 CACAGGGTAGCGCGTCGCTGAGGAACTCTTGCTCAATCTGGACAGCCTCAGTGATGATG- 197438 Query 48078 GCTTA-ACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 |||| ||| || ||| || | ||||| | || | |||||| ||| Sbjct 197437 GCTTGGACGGCCTCCTTGCTGGGGCGAGTGTTGAGAAGA------GAGAAGAGCAGGCAA 197384 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| |||||| ||| || || || ||||||| |||||||||| |||||| Sbjct 197383 GCAAAGTCAGTGTGCATGCCCTCATCACGAGAGATGAGCTCGTTGGAGAAAGTAAGACCA 197324 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | | ||||||||||| || | ||||| ||||| ||| ||||| Sbjct 197323 GGCATCAGACCACGTTTCTTGAGCCAGAAGATGGATGCGAACGAGCCGCTGAAAAAGATA 197264 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 || || || || ||||||||| ||| | | |||| | ||||||||| |||||| Sbjct 197263 CCTTCGACAGCAGCGAACGCGACGAGACGGCTGGCAAAAGTGGAGTTCTTGTCAGAGATC 197204 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || || |||||||| |||||||| |||||| || Sbjct 197203 CATCGCAGGGCCCAGTCGGCCTTCTTGCGGATGCAGGG 197166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531216394240