Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq49 141 3e-28
seq43 132 1e-25
>seq49
Length=2757401
Score = 141 bits (156), Expect = 3e-28
Identities = 351/532 (66%), Gaps = 3/532 (1%)
Strand=Plus/Minus
Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028
|||||| | |||||| ||||| || || || | ||| | | ||||| || |||
Sbjct 441778 CTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGACATCAGCGTGCCATGG 441719
Query 156029 CTCCAGATACATAGCAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGC 156085
||| || || |||||||| ||| | | | ||||||||||| || || || |||||
Sbjct 441718 CTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGC 441659
Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145
|| || ||| | |||| ||||||||||| | ||| || || || || ||||| ||||
Sbjct 441658 CGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGACGTTCCGTTGGTGCCGCC 441599
Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205
||| | || || | | || | || | | || |||||||| || | ||
Sbjct 441598 AATGTATGAGCCGGTGGCACGGATTCGGTGGACGTTGAGGCCAATACCGCCAGCGGTCTT 441539
Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
|| || || ||| ||| | || | | | || || ||||| || || | |||
Sbjct 441538 GGAGATCAAGGCACATGTCTTGAGTGTGTCGTAGATGCCGTCAATGCTGTCCTCCTTCAT 441479
Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325
| || |||| ||| | |||||| ||| || || ||||||||||| || ||
Sbjct 441478 GTCGATGAGGAAGCAGGAAGACATCTGAGGTGATGGAGTACCTGCGTTGAATAGCGTCGG 441419
Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385
|| || || | || ||||| | ||||| || ||||| ||||| | |||||| |
Sbjct 441418 TGAAGCGTGTGTGAAGTACTTTTGTGACATGTAGTCGTAGGTCTCAATGGCCTTCTCGAT 441359
Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445
|| ||||| |||| || || ||| | ||| ||| || || || ||||| |||
Sbjct 441358 ATCCTCACCGTGGATACCGACAGCGACACGCATGAGCATGTGTTGTGGGCGCTCAGCAAC 441299
Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAA 156497
| ||||| || || || ||||||| ||| ||||| || || || ||||||
Sbjct 441298 CTTGCCATCGATGCGGAGGAGGTATGAGCGCTCCAGTGTCTTGAAGCCGAAA 441247
>seq43
Length=1231009
Score = 132 bits (146), Expect = 1e-25
Identities = 184/255 (72%), Gaps = 2/255 (1%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGC-GTCATATAGCCG 251465
|| ||||| || | | |||||||| || |||| ||||| || | || | | || ||
Sbjct 645471 ATCAGACCGCAGATGTCGCACACATGTACAGTGTACGCATCTGAGACTGTGAAA-AGACG 645529
Query 251466 ACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525
||||| |||| || || ||||||| ||||||||||||||| ||||| || |||||
Sbjct 645530 CTCCTTGAGGAAGGCAGCGGCGCCGTGTGCAATCATACAATCACGTTCCATCTCTCCGAA 645589
Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGG 251585
||| |||||||| || | ||| | ||||||| ||||||| ||||||||| | || ||
Sbjct 645590 ACGGAGACCACCGTCCCTAGCACGACCCTCGACAGGCTGGCGAGTGAGAATTTGCAGCGG 645649
Query 251586 ACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGC 251645
||| || ||| || ||| |||| |||||||| | ||||||||||| | |
Sbjct 645650 ACCACGGGCGCGAGCGTGGATCTTGTCATCGACCATATGTCTCAGACGCTGGTAATACGT 645709
Query 251646 GGGACCGATGAAGAT 251660
||||| | ||| ||
Sbjct 645710 CGGACCCAGGAAAAT 645724
Score = 93.3 bits (102), Expect = 1e-13
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642
||||| |||||||| |||||||| || || | || || || || ||||| || |
Sbjct 395772 CTTGACCAAACGACGTTGAATATATCCTGTCTCGGCGGTCTTGACTGCCGTATCGATCAA 395831
Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTA-GCCCCCCAATAA 302701
||| |||||||| ||||||| || ||||| | || || |||| | || | |
Sbjct 395832 ACCTTCACGACCAGCCATAGCGTGAAAGAAGAATTCGGAAGG-CGTAAGACCACGGAGGT 395890
Query 302702 AGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCA 302761
| ||| |||| ||||||||||| | ||||||||| | ||| ||| | || || ||||
Sbjct 395891 AAGAGTTCTCCACGAAACCACGAGACTCGGGCGAGTAATCGTCCTTTGAGAAATGCGGCA 395950
Query 302762 GGGTCCTGTTCTCATAGCCGTATGGGATACGCT 302794
||||||| || | ||||| || |||||||
Sbjct 395951 ACGTCCTGTACTTGAAACCGTACGGAATACGCT 395983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471815035357832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |