Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq49 141 3e-28 seq43 132 1e-25 >seq49 Length=2757401 Score = 141 bits (156), Expect = 3e-28 Identities = 351/532 (66%), Gaps = 3/532 (1%) Strand=Plus/Minus Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 |||||| | |||||| ||||| || || || | ||| | | ||||| || ||| Sbjct 441778 CTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGACATCAGCGTGCCATGG 441719 Query 156029 CTCCAGATACATAGCAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGC 156085 ||| || || |||||||| ||| | | | ||||||||||| || || || ||||| Sbjct 441718 CTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGC 441659 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 || || ||| | |||| ||||||||||| | ||| || || || || ||||| |||| Sbjct 441658 CGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGACGTTCCGTTGGTGCCGCC 441599 Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205 ||| | || || | | || | || | | || |||||||| || | || Sbjct 441598 AATGTATGAGCCGGTGGCACGGATTCGGTGGACGTTGAGGCCAATACCGCCAGCGGTCTT 441539 Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 || || || ||| ||| | || | | | || || ||||| || || | ||| Sbjct 441538 GGAGATCAAGGCACATGTCTTGAGTGTGTCGTAGATGCCGTCAATGCTGTCCTCCTTCAT 441479 Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 | || |||| ||| | |||||| ||| || || ||||||||||| || || Sbjct 441478 GTCGATGAGGAAGCAGGAAGACATCTGAGGTGATGGAGTACCTGCGTTGAATAGCGTCGG 441419 Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385 || || || | || ||||| | ||||| || ||||| ||||| | |||||| | Sbjct 441418 TGAAGCGTGTGTGAAGTACTTTTGTGACATGTAGTCGTAGGTCTCAATGGCCTTCTCGAT 441359 Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445 || ||||| |||| || || ||| | ||| ||| || || || ||||| ||| Sbjct 441358 ATCCTCACCGTGGATACCGACAGCGACACGCATGAGCATGTGTTGTGGGCGCTCAGCAAC 441299 Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAA 156497 | ||||| || || || ||||||| ||| ||||| || || || |||||| Sbjct 441298 CTTGCCATCGATGCGGAGGAGGTATGAGCGCTCCAGTGTCTTGAAGCCGAAA 441247 >seq43 Length=1231009 Score = 132 bits (146), Expect = 1e-25 Identities = 184/255 (72%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGC-GTCATATAGCCG 251465 || ||||| || | | |||||||| || |||| ||||| || | || | | || || Sbjct 645471 ATCAGACCGCAGATGTCGCACACATGTACAGTGTACGCATCTGAGACTGTGAAA-AGACG 645529 Query 251466 ACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAA 251525 ||||| |||| || || ||||||| ||||||||||||||| ||||| || ||||| Sbjct 645530 CTCCTTGAGGAAGGCAGCGGCGCCGTGTGCAATCATACAATCACGTTCCATCTCTCCGAA 645589 Query 251526 ACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGG 251585 ||| |||||||| || | ||| | ||||||| ||||||| ||||||||| | || || Sbjct 645590 ACGGAGACCACCGTCCCTAGCACGACCCTCGACAGGCTGGCGAGTGAGAATTTGCAGCGG 645649 Query 251586 ACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGC 251645 ||| || ||| || ||| |||| |||||||| | ||||||||||| | | Sbjct 645650 ACCACGGGCGCGAGCGTGGATCTTGTCATCGACCATATGTCTCAGACGCTGGTAATACGT 645709 Query 251646 GGGACCGATGAAGAT 251660 ||||| | ||| || Sbjct 645710 CGGACCCAGGAAAAT 645724 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642 ||||| |||||||| |||||||| || || | || || || || ||||| || | Sbjct 395772 CTTGACCAAACGACGTTGAATATATCCTGTCTCGGCGGTCTTGACTGCCGTATCGATCAA 395831 Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTA-GCCCCCCAATAA 302701 ||| |||||||| ||||||| || ||||| | || || |||| | || | | Sbjct 395832 ACCTTCACGACCAGCCATAGCGTGAAAGAAGAATTCGGAAGG-CGTAAGACCACGGAGGT 395890 Query 302702 AGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCA 302761 | ||| |||| ||||||||||| | ||||||||| | ||| ||| | || || |||| Sbjct 395891 AAGAGTTCTCCACGAAACCACGAGACTCGGGCGAGTAATCGTCCTTTGAGAAATGCGGCA 395950 Query 302762 GGGTCCTGTTCTCATAGCCGTATGGGATACGCT 302794 ||||||| || | ||||| || ||||||| Sbjct 395951 ACGTCCTGTACTTGAAACCGTACGGAATACGCT 395983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815035357832