Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq60 167 3e-35 seq49 149 8e-30 seq46 114 2e-19 seq51 111 2e-18 seq47 98.7 1e-14 >seq60 Length=2355965 Score = 167 bits (184), Expect = 3e-35 Identities = 141/171 (82%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 1592131 GTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCG 1592189 ||||||| || |||| ||| | ||||| ||| | ||||||||| | |||||||||| Sbjct 259519 GTGGGACCAGAAGTTCATGC-AGGTCGACCAGGAGATGCTCTTTGAGATTATCCTCGCCG 259577 Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249 |||||||||||||||||||| | ||||| || | || |||||| |||| |||||||||| Sbjct 259578 CCAACTACCTCGACATCAAGGCCCTGCTTGACGTCGGCTGCAAGACTGTCGCCAACATGA 259637 Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||| ||||| ||||| ||||||||||| ||||| |||||| || ||| Sbjct 259638 TCAAGGGAAAGTCTCCCGACGAGATCCGCAAAACCTTCAACATCCAGAACG 259688 >seq49 Length=2757401 Score = 149 bits (164), Expect = 8e-30 Identities = 215/301 (71%), Gaps = 2/301 (1%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| ||||||| ||| | || |||||||| || | ||| ||||| || Sbjct 441676 CTGGTCGACGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGA 441617 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||||||||| | | ||| | ||||| ||| || | ||| || | ||| Sbjct 441616 CGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGGACGTTGAGGCC 441557 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCT 1630243 || ||||| || | ||||||||| | || || ||| ||||| |||||||||||||| | Sbjct 441556 AATACCGCCAGCGGTCTTGGAGATCAAGGCACA-TGTCTTGAGTGTGTCGTAGATGCCGT 441498 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 | || ||| |||||||||| | ||| ||||| || || | || || | || | Sbjct 441497 CAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGATGGAGTAC 441438 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363 | |||||||| ||||| || | || ||||| ||| | |||||| |||||||| Sbjct 441437 CTGCGTTGAATAGCGTCGGTGAAGCGTGTGTGAAGTACTTTTGTGACATGTAGTCGTAGG 441378 Query 1630364 T 1630364 | Sbjct 441377 T 441377 Score = 96.9 bits (106), Expect = 4e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 ||||||| ||||| ||||| || || || || ||||||||||||||||||||| || Sbjct 441812 TCCACAGAGCGTAGAAGAGATCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 441753 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||||||| || | | | || |||||||| ||||| |||||| |||||||| ||| Sbjct 441752 GGTCGAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCCG 441693 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 441692 GACGCTTGTTGCCACC 441677 >seq46 Length=533260 Score = 114 bits (126), Expect = 2e-19 Identities = 169/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| || || || ||| |||||| |||||||||||||| | |||||||| |||||| Sbjct 197672 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCAT 197613 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACGCGAGCAGG 868816 | || ||||||| | | |||| ||| | || |||||| || |||| Sbjct 197612 GAAGTCAAAGGGGTTGGTGGCGTGGTAGACCTTGGTGTTGCCCAGAGCGA-GC-AGCAAA 197555 Query 868817 CGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCC 868876 || || || || ||||| ||||||||||||||||| |||||||||||||| || || Sbjct 197554 CGATCAGCAACGAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGAGCA 197495 Query 868877 ACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932 || |||| ||||| | ||||||| ||| |||| ||| ||||| |||||| Sbjct 197494 CAGGGTAGCGCGTCGCTGAGGAACTCTTGCTCAATCTGGACAGCCTCAGTGATGAT 197439 Score = 104 bits (114), Expect = 3e-16 Identities = 177/256 (69%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||| ||||| || ||||||||| || || || | | |||| | | || Sbjct 197036 CCGAGTGGACATTCTCCATCATGATCTGGAAACCATAGAAACAACGCGCCTCCGGTATTT 196977 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || | ||| || || ||||||||||| |||||||| || |||||||| Sbjct 196976 GTACTTCGCTGGAGAAACGCTCGACCAGGTTCTCGTTGACGATGCCATCCGAGGCGGCGA 196917 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCT---GAGCGACACCCAGT 869807 |||| || |||||||| ||| ||| ||||||||| ||| | | || ||||| Sbjct 196916 AAAAGGCGAGGACGTGGGAGATGAAGAAGCGCTCGTCATCGTTCAGGCGCTTGTTCCAGT 196857 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | || | ||| || | ||| ||||||||||||| || ||||||||||| | Sbjct 196856 CGTGAAGATCCTTGGAGAGATCAATCTCTTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCT 196797 Query 869868 TGTACATCTCCCATAC 869883 ||||||| | ||| || Sbjct 196796 TGTACATTTGCCAGAC 196781 >seq51 Length=261805 Score = 111 bits (122), Expect = 2e-18 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104 |||| ||||| |||||||| ||||||||||| | ||| ||| | || || || | Sbjct 53345 AGGATAGCATAGGCGGCACAGTGACGTGCGTCATCAGGAACTGCCCGACGGGTCTGGGGG 53286 Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164 ||||||| || |||||| |||||||| ||| | ||||||||||||||||| || || | Sbjct 53285 AGCCGTGTTTCGACAAGCTCGAGGCCAAGCTGGGACACGCCATGCTGTCGATTCCAGCGA 53226 Query 19165 CCAAGGGATTCGAGATTGG 19183 ||||||| || ||||| || Sbjct 53225 CCAAGGGGTTTGAGATAGG 53207 Score = 91.5 bits (100), Expect = 2e-12 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180 |||||| ||| ||||||||| ||||| ||||| | || | ||||| |||||||| Sbjct 53998 GTCGGCGCCATTATCGACGGCTGCCCGCCTGGCATGGCGCTTACAGAGGCAGACATCCAA 53939 Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240 || ||| || || |||||||| |||||| || | | || |||||||||||| Sbjct 53938 CCCCAGATGACGCGCCGCCGACCAGGCCAGTCGGCCATCACGACTCCGCGCAACGAGAAG 53879 Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCC 18293 |||||||| || ||||| || || ||| ||| |||| || ||| |||| Sbjct 53878 GATCGCGTTGAGATTCAGTCAGGAACAGAGTTTGGCATCACACTAGGCACGCC 53826 >seq47 Length=469943 Score = 98.7 bits (108), Expect = 1e-14 Identities = 183/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027 || ||||| ||||| |||||||| || || ||||| || | || || || ||||| | Sbjct 206412 GAAGCCGTTCTCGAGCTCAACGCCTCTGATGAGCGTGGTATTGATGTTGTCCGCAATCGC 206353 Query 1574028 ATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATC 1574087 |||||| |||| |||| | || |||| || || | || ||| | |||| Sbjct 206352 ATCAAGGGTTTCGCCCAGAAGAAGGTCACATTGCCCCCGGGTAGACAAAAGCTCGTCATT 206293 Query 1574088 CTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAA 1574147 ||||||||||| ||| || | ||| | || |||||||| || || ||||||||| Sbjct 206292 CTCGACGAGGCGGACAGCATGACGAGTGGTGCACAGCAGGCGCTCAGGAGGACCATGGAA 206233 Query 1574148 AAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAG 1574207 | ||| | ||| |||||||| ||| | || || ||| ||| | | |||||||| Sbjct 206232 ATCTACAGCTCCACTACGCGCTTCGCCTTTGCTTGTAACCAGTCCAACAAGATCATCGAG 206173 Query 1574208 GCCCTCCAAAGTCGCTGCGCCATTCTGCG 1574236 | || ||| | |||||||| || || Sbjct 206172 CCGCTGCAATCAAGATGCGCCATCCTCCG 206144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107128039203112