Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq60 167 3e-35
seq49 149 8e-30
seq46 114 2e-19
seq51 111 2e-18
seq47 98.7 1e-14
>seq60
Length=2355965
Score = 167 bits (184), Expect = 3e-35
Identities = 141/171 (82%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 1592131 GTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCG 1592189
||||||| || |||| ||| | ||||| ||| | ||||||||| | ||||||||||
Sbjct 259519 GTGGGACCAGAAGTTCATGC-AGGTCGACCAGGAGATGCTCTTTGAGATTATCCTCGCCG 259577
Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249
|||||||||||||||||||| | ||||| || | || |||||| |||| ||||||||||
Sbjct 259578 CCAACTACCTCGACATCAAGGCCCTGCTTGACGTCGGCTGCAAGACTGTCGCCAACATGA 259637
Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||| ||||| ||||| ||||||||||| ||||| |||||| || |||
Sbjct 259638 TCAAGGGAAAGTCTCCCGACGAGATCCGCAAAACCTTCAACATCCAGAACG 259688
>seq49
Length=2757401
Score = 149 bits (164), Expect = 8e-30
Identities = 215/301 (71%), Gaps = 2/301 (1%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
||||||||||||||| ||||||| ||| | || |||||||| || | ||| ||||| ||
Sbjct 441676 CTGGTCGACGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGA 441617
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
| ||||||||||| | | ||| | ||||| ||| || | ||| || | |||
Sbjct 441616 CGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGGACGTTGAGGCC 441557
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCT 1630243
|| ||||| || | ||||||||| | || || ||| ||||| |||||||||||||| |
Sbjct 441556 AATACCGCCAGCGGTCTTGGAGATCAAGGCACA-TGTCTTGAGTGTGTCGTAGATGCCGT 441498
Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303
| || ||| |||||||||| | ||| ||||| || || | || || | || |
Sbjct 441497 CAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGATGGAGTAC 441438
Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363
| |||||||| ||||| || | || ||||| ||| | |||||| ||||||||
Sbjct 441437 CTGCGTTGAATAGCGTCGGTGAAGCGTGTGTGAAGTACTTTTGTGACATGTAGTCGTAGG 441378
Query 1630364 T 1630364
|
Sbjct 441377 T 441377
Score = 96.9 bits (106), Expect = 4e-14
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524
||||||| ||||| ||||| || || || || ||||||||||||||||||||| ||
Sbjct 441812 TCCACAGAGCGTAGAAGAGATCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 441753
Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584
||||||| || | | | || |||||||| ||||| |||||| |||||||| |||
Sbjct 441752 GGTCGAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCCG 441693
Query 1628585 TGCGCTTGCCGCCGCC 1628600
|||||| ||| ||
Sbjct 441692 GACGCTTGTTGCCACC 441677
>seq46
Length=533260
Score = 114 bits (126), Expect = 2e-19
Identities = 169/236 (72%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758
||| || || || ||| |||||| |||||||||||||| | |||||||| ||||||
Sbjct 197672 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCAT 197613
Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACGCGAGCAGG 868816
| || ||||||| | | |||| ||| | || |||||| || ||||
Sbjct 197612 GAAGTCAAAGGGGTTGGTGGCGTGGTAGACCTTGGTGTTGCCCAGAGCGA-GC-AGCAAA 197555
Query 868817 CGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCC 868876
|| || || || ||||| ||||||||||||||||| |||||||||||||| || ||
Sbjct 197554 CGATCAGCAACGAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGAGCA 197495
Query 868877 ACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932
|| |||| ||||| | ||||||| ||| |||| ||| ||||| ||||||
Sbjct 197494 CAGGGTAGCGCGTCGCTGAGGAACTCTTGCTCAATCTGGACAGCCTCAGTGATGAT 197439
Score = 104 bits (114), Expect = 3e-16
Identities = 177/256 (69%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690
||||||||| ||||| || ||||||||| || || || | | |||| | | ||
Sbjct 197036 CCGAGTGGACATTCTCCATCATGATCTGGAAACCATAGAAACAACGCGCCTCCGGTATTT 196977
Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750
| || || | ||| || || ||||||||||| |||||||| || ||||||||
Sbjct 196976 GTACTTCGCTGGAGAAACGCTCGACCAGGTTCTCGTTGACGATGCCATCCGAGGCGGCGA 196917
Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCT---GAGCGACACCCAGT 869807
|||| || |||||||| ||| ||| ||||||||| ||| | | || |||||
Sbjct 196916 AAAAGGCGAGGACGTGGGAGATGAAGAAGCGCTCGTCATCGTTCAGGCGCTTGTTCCAGT 196857
Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867
| || | ||| || | ||| ||||||||||||| || ||||||||||| |
Sbjct 196856 CGTGAAGATCCTTGGAGAGATCAATCTCTTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCT 196797
Query 869868 TGTACATCTCCCATAC 869883
||||||| | ||| ||
Sbjct 196796 TGTACATTTGCCAGAC 196781
>seq51
Length=261805
Score = 111 bits (122), Expect = 2e-18
Identities = 108/139 (78%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 19045 AGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCG 19104
|||| ||||| |||||||| ||||||||||| | ||| ||| | || || || |
Sbjct 53345 AGGATAGCATAGGCGGCACAGTGACGTGCGTCATCAGGAACTGCCCGACGGGTCTGGGGG 53286
Query 19105 AGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCA 19164
||||||| || |||||| |||||||| ||| | ||||||||||||||||| || || |
Sbjct 53285 AGCCGTGTTTCGACAAGCTCGAGGCCAAGCTGGGACACGCCATGCTGTCGATTCCAGCGA 53226
Query 19165 CCAAGGGATTCGAGATTGG 19183
||||||| || ||||| ||
Sbjct 53225 CCAAGGGGTTTGAGATAGG 53207
Score = 91.5 bits (100), Expect = 2e-12
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 18121 GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAG 18180
|||||| ||| ||||||||| ||||| ||||| | || | ||||| ||||||||
Sbjct 53998 GTCGGCGCCATTATCGACGGCTGCCCGCCTGGCATGGCGCTTACAGAGGCAGACATCCAA 53939
Query 18181 CCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCC 18240
|| ||| || || |||||||| |||||| || | | || ||||||||||||
Sbjct 53938 CCCCAGATGACGCGCCGCCGACCAGGCCAGTCGGCCATCACGACTCCGCGCAACGAGAAG 53879
Query 18241 GATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCC 18293
|||||||| || ||||| || || ||| ||| |||| || ||| ||||
Sbjct 53878 GATCGCGTTGAGATTCAGTCAGGAACAGAGTTTGGCATCACACTAGGCACGCC 53826
>seq47
Length=469943
Score = 98.7 bits (108), Expect = 1e-14
Identities = 183/269 (68%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027
|| ||||| ||||| |||||||| || || ||||| || | || || || ||||| |
Sbjct 206412 GAAGCCGTTCTCGAGCTCAACGCCTCTGATGAGCGTGGTATTGATGTTGTCCGCAATCGC 206353
Query 1574028 ATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATC 1574087
|||||| |||| |||| | || |||| || || | || ||| | ||||
Sbjct 206352 ATCAAGGGTTTCGCCCAGAAGAAGGTCACATTGCCCCCGGGTAGACAAAAGCTCGTCATT 206293
Query 1574088 CTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAA 1574147
||||||||||| ||| || | ||| | || |||||||| || || |||||||||
Sbjct 206292 CTCGACGAGGCGGACAGCATGACGAGTGGTGCACAGCAGGCGCTCAGGAGGACCATGGAA 206233
Query 1574148 AAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAG 1574207
| ||| | ||| |||||||| ||| | || || ||| ||| | | ||||||||
Sbjct 206232 ATCTACAGCTCCACTACGCGCTTCGCCTTTGCTTGTAACCAGTCCAACAAGATCATCGAG 206173
Query 1574208 GCCCTCCAAAGTCGCTGCGCCATTCTGCG 1574236
| || ||| | |||||||| || ||
Sbjct 206172 CCGCTGCAATCAAGATGCGCCATCCTCCG 206144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107128039203112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |