Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq60 149 1e-29
seq46 134 2e-25
seq49 118 2e-20
seq1 111 2e-18
seq47 93.3 7e-13
>seq60
Length=2355965
Score = 149 bits (164), Expect = 1e-29
Identities = 123/150 (82%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671
|||||||||| | ||||||||| | ||||||||||||||||||||||||||||||
Sbjct 259539 AGGTCGACCAGGAGATGCTCTTTGAGATTATCCTCGCCGCCAACTACCTCGACATCAAGG 259598
Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731
|||| || || | || |||||||| || |||||| | |||||||| ||||| ||||| |
Sbjct 259599 CCCTGCTTGACGTCGGCTGCAAGACTGTCGCCAACATGATCAAGGGAAAGTCTCCCGACG 259658
Query 2035732 ACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||| ||||| |||||| || |||
Sbjct 259659 AGATCCGCAAAACCTTCAACATCCAGAACG 259688
>seq46
Length=533260
Score = 134 bits (148), Expect = 2e-25
Identities = 174/236 (74%), Gaps = 6/236 (3%)
Strand=Plus/Minus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| || || || ||| |||||| |||||||||||||| | |||||||| ||||||
Sbjct 197671 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATG 197612
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTC---TCGCACCCGAGCGACGCAAGCAGG 794024
| || ||||||| | ||||| ||| | || || |||||| ||| |||
Sbjct 197611 AAGTCAAAGGGGTTGGTGGCGTGGTAGACCTTGGTGTTGC-CCAGAGCGA-GCA-GCAAA 197555
Query 794025 CGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCC 794084
|| || || ||||| |||||||||||||||||||| |||||||||||||| || ||
Sbjct 197554 CGATCAGCAACGAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGAGCA 197495
Query 794085 ACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140
||| |||| ||||||| ||||||| ||| |||| ||| ||||| |||||||
Sbjct 197494 CAGGGTAGCGCGTCGCTGAGGAACTCTTGCTCAATCTGGACAGCCTCAGTGATGAT 197439
>seq49
Length=2757401
Score = 118 bits (130), Expect = 2e-20
Identities = 206/300 (69%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| ||||| ||||||| ||| | || |||||||| || | || ||||| ||
Sbjct 441676 CTGGTCGACGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGA 441617
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| ||||||||||| | | ||| | ||| | ||| || | ||| || | |||
Sbjct 441616 CGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGGACGTTGAGGCC 441557
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| ||||| || | ||||||||| | || || | || || || ||||||||||| ||
Sbjct 441556 AATACCGCCAGCGGTCTTGGAGATCAAGGCACATGTCTTGAGTGTGTCGTAGATGCCGTC 441497
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||| | || ||||| || || | || || | || ||
Sbjct 441496 AATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGATGGAGTACC 441437
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839
|| ||||| ||||| || | || ||| | ||| ||| |||||| ||||||||
Sbjct 441436 TGCGTTGAATAGCGTCGGTGAAGCGTGTGTGAAGTACTTTTGTGACATGTAGTCGTAGGT 441377
Score = 96.9 bits (106), Expect = 5e-14
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936
||||||| |||| |||||||| || || || ||||||||||||||||||||| |
Sbjct 441812 TCCACAGAGCGTAGAAGAGATCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 441753
Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996
||||||| || | | || || |||||||| ||||| |||||| |||||||| |||
Sbjct 441752 GGTCGAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCCG 441693
Query 2071997 TGCGCTTGCCGCCGCC 2072012
|||||| ||| ||
Sbjct 441692 GACGCTTGTTGCCACC 441677
>seq1
Length=3101661
Score = 111 bits (122), Expect = 2e-18
Identities = 197/282 (70%), Gaps = 8/282 (3%)
Strand=Plus/Plus
Query 2411377 TCGTCGAGA---TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTG 2411433
||||||||| |||||||||||| | | || |||||||||||| || |||||
Sbjct 1230204 TCGTCGAGAACATCAATCTTGGAGTCTGGGTCTGAGGCGCTCATCTTTCCA-CCTTGC-- 1230260
Query 2411434 AGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGG 2411493
|| || || |||| ||||| | || ||| ||||| |||||| | | |||||
Sbjct 1230261 AGTCCGGGAACCATGGGGTTCATCAAGTGAGCGCGCTCCTTGTAGCCAATCTTGGGCAGT 1230320
Query 2411494 TGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACG 2411553
||| || | ||||| |||||||| || || || ||||| || | || ||
Sbjct 1230321 ACGTCCTTTGCGAGTGCAAAAATCTTGCGTTGATCTACACCACCAAATTGAACATCTACA 1230380
Query 2411554 TCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCG-G 2411612
|| |||| |||||||||||||||||||||||| ||||||| ||| || || || | |
Sbjct 1230381 TCAAGGTACTGCTCGTCGAGGGCCTGCATGAGGGGGTAGATGAGTCCACTCAGTGGGGCG 1230440
Query 2411613 GTTGCGGTCCATCTTGACCACCTGGGCGGCGGCCTTTTGCGC 2411654
|| | || | |||||| || | ||| | ||||||| |||
Sbjct 1230441 TTTTCTGT-CTGCTTGACGACTTCGGCACCAGCCTTTTTCGC 1230481
>seq47
Length=469943
Score = 93.3 bits (102), Expect = 7e-13
Identities = 324/501 (65%), Gaps = 6/501 (1%)
Strand=Plus/Minus
Query 2018901 GCCGACTTTGGCCTCCCGTGGATCGAAAAGTACCG-CCCGACAGTGCTCGACGACATCGT 2018959
||||||| |||| | || | ||||||||||| |||| | ||||| || ||||
Sbjct 206616 GCCGACTGACGCCTGTCCAGGGTAGAAAAGTACCGTCCCGTCTAC-CTCGATGATGTCGT 206558
Query 2018960 GGGCAACGAGCACGCCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAA 2019019
|||||| | || ||| ||||||| | ||| |||||||||||||| |
Sbjct 206557 CGGCAACACAGAAACCATTGAGCGCCTCAAGATCATTGCCAAAGACGGCAACATGCCACA 206498
Query 2019020 CCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCG 2019079
| | | | | ||| ||| || | || || || || |||| ||||| || ||
Sbjct 206497 CATGATCATATCCGGCATGCCGGGTATCGGAAAAACAACCTCCATCCTCTGCCTCGCCCG 206438
Query 2019080 CGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCG 2019139
| ||| | |||| || | | || ||||| ||||| ||||| || || || |||||
Sbjct 206437 CCAACTCCTTGGCGATGCTTACAAAGAAGCCGTTCTCGAGCTCAACGCCTCTGATGAGCG 206378
Query 2019140 CGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAA--TCGACCTG 2019197
|| | || || || || | ||||||| | ||| | | ||||| || ||
Sbjct 206377 TGGTATTGATGTTGTCCGCAATCGCATCAAGGGTTTCGC--CCAGAAGAAGGTCACATTG 206320
Query 2019198 CCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCC 2019257
|| || || | || ||| | |||| ||||| ||||| ||| || | ||| | ||
Sbjct 206319 CCCCCGGGTAGACAAAAGCTCGTCATTCTCGACGAGGCGGACAGCATGACGAGTGGTGCA 206260
Query 2019258 CAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCC 2019317
|||||||| ||| | ||||||||||| |||| | ||| ||||| || || | ||
Sbjct 206259 CAGCAGGCGCTCAGGAGGACCATGGAAATCTACAGCTCCACTACGCGCTTCGCCTTTGCT 206200
Query 2019318 TGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTT 2019377
|| ||| ||| | | ||||||| | || || | ||||||||| | || |
Sbjct 206199 TGTAACCAGTCCAACAAGATCATCGAGCCGCTGCAATCAAGATGCGCCATCCTCCGATAC 206140
Query 2019378 GCGCGCCTCACCGACGCCCAG 2019398
|| || || || || ||||||
Sbjct 206139 GCCCGTCTTACTGATGCCCAG 206119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916231933059704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |