Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq60 149 1e-29 seq46 134 2e-25 seq49 118 2e-20 seq1 111 2e-18 seq47 93.3 7e-13 >seq60 Length=2355965 Score = 149 bits (164), Expect = 1e-29 Identities = 123/150 (82%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671 |||||||||| | ||||||||| | |||||||||||||||||||||||||||||| Sbjct 259539 AGGTCGACCAGGAGATGCTCTTTGAGATTATCCTCGCCGCCAACTACCTCGACATCAAGG 259598 Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731 |||| || || | || |||||||| || |||||| | |||||||| ||||| ||||| | Sbjct 259599 CCCTGCTTGACGTCGGCTGCAAGACTGTCGCCAACATGATCAAGGGAAAGTCTCCCGACG 259658 Query 2035732 ACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||| ||||| |||||| || ||| Sbjct 259659 AGATCCGCAAAACCTTCAACATCCAGAACG 259688 >seq46 Length=533260 Score = 134 bits (148), Expect = 2e-25 Identities = 174/236 (74%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || || || || ||| |||||| |||||||||||||| | |||||||| |||||| Sbjct 197671 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGCGAGATGTTCTCCATG 197612 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTC---TCGCACCCGAGCGACGCAAGCAGG 794024 | || ||||||| | ||||| ||| | || || |||||| ||| ||| Sbjct 197611 AAGTCAAAGGGGTTGGTGGCGTGGTAGACCTTGGTGTTGC-CCAGAGCGA-GCA-GCAAA 197555 Query 794025 CGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCC 794084 || || || ||||| |||||||||||||||||||| |||||||||||||| || || Sbjct 197554 CGATCAGCAACGAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGAGCA 197495 Query 794085 ACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 ||| |||| ||||||| ||||||| ||| |||| ||| ||||| ||||||| Sbjct 197494 CAGGGTAGCGCGTCGCTGAGGAACTCTTGCTCAATCTGGACAGCCTCAGTGATGAT 197439 >seq49 Length=2757401 Score = 118 bits (130), Expect = 2e-20 Identities = 206/300 (69%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| ||||| ||||||| ||| | || |||||||| || | || ||||| || Sbjct 441676 CTGGTCGACGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGA 441617 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | ||||||||||| | | ||| | ||| | ||| || | ||| || | ||| Sbjct 441616 CGTTCCGTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGGACGTTGAGGCC 441557 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || ||||| || | ||||||||| | || || | || || || ||||||||||| || Sbjct 441556 AATACCGCCAGCGGTCTTGGAGATCAAGGCACATGTCTTGAGTGTGTCGTAGATGCCGTC 441497 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | || ||||| || || | || || | || || Sbjct 441496 AATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGATGGAGTACC 441437 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 || ||||| ||||| || | || ||| | ||| ||| |||||| |||||||| Sbjct 441436 TGCGTTGAATAGCGTCGGTGAAGCGTGTGTGAAGTACTTTTGTGACATGTAGTCGTAGGT 441377 Score = 96.9 bits (106), Expect = 5e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 ||||||| |||| |||||||| || || || ||||||||||||||||||||| | Sbjct 441812 TCCACAGAGCGTAGAAGAGATCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 441753 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 ||||||| || | | || || |||||||| ||||| |||||| |||||||| ||| Sbjct 441752 GGTCGAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCCG 441693 Query 2071997 TGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 441692 GACGCTTGTTGCCACC 441677 >seq1 Length=3101661 Score = 111 bits (122), Expect = 2e-18 Identities = 197/282 (70%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 2411377 TCGTCGAGA---TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTG 2411433 ||||||||| |||||||||||| | | || |||||||||||| || ||||| Sbjct 1230204 TCGTCGAGAACATCAATCTTGGAGTCTGGGTCTGAGGCGCTCATCTTTCCA-CCTTGC-- 1230260 Query 2411434 AGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGG 2411493 || || || |||| ||||| | || ||| ||||| |||||| | | ||||| Sbjct 1230261 AGTCCGGGAACCATGGGGTTCATCAAGTGAGCGCGCTCCTTGTAGCCAATCTTGGGCAGT 1230320 Query 2411494 TGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACG 2411553 ||| || | ||||| |||||||| || || || ||||| || | || || Sbjct 1230321 ACGTCCTTTGCGAGTGCAAAAATCTTGCGTTGATCTACACCACCAAATTGAACATCTACA 1230380 Query 2411554 TCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCG-G 2411612 || |||| |||||||||||||||||||||||| ||||||| ||| || || || | | Sbjct 1230381 TCAAGGTACTGCTCGTCGAGGGCCTGCATGAGGGGGTAGATGAGTCCACTCAGTGGGGCG 1230440 Query 2411613 GTTGCGGTCCATCTTGACCACCTGGGCGGCGGCCTTTTGCGC 2411654 || | || | |||||| || | ||| | ||||||| ||| Sbjct 1230441 TTTTCTGT-CTGCTTGACGACTTCGGCACCAGCCTTTTTCGC 1230481 >seq47 Length=469943 Score = 93.3 bits (102), Expect = 7e-13 Identities = 324/501 (65%), Gaps = 6/501 (1%) Strand=Plus/Minus Query 2018901 GCCGACTTTGGCCTCCCGTGGATCGAAAAGTACCG-CCCGACAGTGCTCGACGACATCGT 2018959 ||||||| |||| | || | ||||||||||| |||| | ||||| || |||| Sbjct 206616 GCCGACTGACGCCTGTCCAGGGTAGAAAAGTACCGTCCCGTCTAC-CTCGATGATGTCGT 206558 Query 2018960 GGGCAACGAGCACGCCGTTGCCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAA 2019019 |||||| | || ||| ||||||| | ||| |||||||||||||| | Sbjct 206557 CGGCAACACAGAAACCATTGAGCGCCTCAAGATCATTGCCAAAGACGGCAACATGCCACA 206498 Query 2019020 CCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCG 2019079 | | | | | ||| ||| || | || || || || |||| ||||| || || Sbjct 206497 CATGATCATATCCGGCATGCCGGGTATCGGAAAAACAACCTCCATCCTCTGCCTCGCCCG 206438 Query 2019080 CGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCG 2019139 | ||| | |||| || | | || ||||| ||||| ||||| || || || ||||| Sbjct 206437 CCAACTCCTTGGCGATGCTTACAAAGAAGCCGTTCTCGAGCTCAACGCCTCTGATGAGCG 206378 Query 2019140 CGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCTTCGAAAAGAA--TCGACCTG 2019197 || | || || || || | ||||||| | ||| | | ||||| || || Sbjct 206377 TGGTATTGATGTTGTCCGCAATCGCATCAAGGGTTTCGC--CCAGAAGAAGGTCACATTG 206320 Query 2019198 CCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCC 2019257 || || || | || ||| | |||| ||||| ||||| ||| || | ||| | || Sbjct 206319 CCCCCGGGTAGACAAAAGCTCGTCATTCTCGACGAGGCGGACAGCATGACGAGTGGTGCA 206260 Query 2019258 CAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCC 2019317 |||||||| ||| | ||||||||||| |||| | ||| ||||| || || | || Sbjct 206259 CAGCAGGCGCTCAGGAGGACCATGGAAATCTACAGCTCCACTACGCGCTTCGCCTTTGCT 206200 Query 2019318 TGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTT 2019377 || ||| ||| | | ||||||| | || || | ||||||||| | || | Sbjct 206199 TGTAACCAGTCCAACAAGATCATCGAGCCGCTGCAATCAAGATGCGCCATCCTCCGATAC 206140 Query 2019378 GCGCGCCTCACCGACGCCCAG 2019398 || || || || || |||||| Sbjct 206139 GCCCGTCTTACTGATGCCCAG 206119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916231933059704