Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq93 107 1e-18
seq48 98.7 6e-16
seq2 93.3 3e-14
>seq93
Length=1979483
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||||| || ||||||||| ||||| || || || || | || | ||
Sbjct 928066 AGCACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGAGAGAGTACGGCCGTCT 928125
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||||||||||||||||||| ||||| || ||||||||| | || | |||||||| ||
Sbjct 928126 TCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCTGGGGGAATACCCTCCTTATCT 928185
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | ||| || || | || ||||||
Sbjct 928186 TGAATCTTGGACTTGACGTTGTCAATAGTATCCGAAGACTCCACCTCTAGAGTGATGGTC 928245
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || | ||||| || |||||||||||
Sbjct 928246 TTTCCAGTCAACGTCTTGACGAAGATCTGCAT 928277
Score = 100 bits (110), Expect = 2e-16
Identities = 140/194 (72%), Gaps = 8/194 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | || |||||||| ||||| ||||| || ||| |||| ||||
Sbjct 928577 AGGACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCC 928636
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||||| || |||||||| | || | |||||||||||
Sbjct 928637 TCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 928696
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| || || |||||| |||| ||| ||
Sbjct 928697 TGGATCTTGCTCTTCAC--AT--TGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGAT 928752
Query 34942 GGTCTTTCCCGTGA 34955
|||||| || ||||
Sbjct 928753 GGTCTTGCCGGTGA 928766
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||| ||||||||| ||||| |||||||| || | || | ||
Sbjct 927838 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGGCCGTCT 927897
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || || ||||| || || |||||||| | || | |||||||||||
Sbjct 927898 TCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 927957
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | | || || || | || || |||
Sbjct 927958 TGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGATTCCACCTCCAACGTGATCGTC 928017
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| |||||||| |||||
Sbjct 928018 TTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049
Score = 96.9 bits (106), Expect = 2e-15
Identities = 92/118 (78%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| ||||| |||||| |||| |||| || || ||||||||||||||
Sbjct 928314 CTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAA 928373
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG 34903
||||| || ||||| || | || | |||||||| || | || ||| ||||||
Sbjct 928374 AATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTTGACTTGACG 928431
>seq48
Length=384450
Score = 98.7 bits (108), Expect = 6e-16
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | || ||||||||| ||||| ||||| || ||| |||| ||||
Sbjct 121967 AGAACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCC 122026
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| ||||||||||| |||||||| || || |||||||| | || | |||||||||||
Sbjct 122027 TCGAGTTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 122085
>seq2
Length=1714173
Score = 93.3 bits (102), Expect = 3e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||| | ||| ||||||||| ||||| |||||||| || |||| | ||
Sbjct 408998 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 408939
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||| || || |||||||| | || | |||||||||||
Sbjct 408938 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 408880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692260164184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |