Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq49 149 6e-31 >seq49 Length=2757401 Score = 149 bits (164), Expect = 6e-31 Identities = 919/1454 (63%), Gaps = 51/1454 (4%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951 ||||| ||||| ||||| ||||| || ||||| | |||| || | ||| ||| | || Sbjct 442728 TTGACAACTTGGAACTCACCCGCGAGTACACGGC-GAGAGTAGATGTTGGAGGTGTAGGG 442670 Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011 ||| || ||||||| || || | || |||| || | || || |||||| || | Sbjct 442669 CTCGAAGCACTCATTGTTTCCGAGAATCTGGGAAGTCGAGGCAGTTGGCATGGGTGCGAT 442610 Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071 | || || || || | ||||| | | || ||| ||||||| | ||||||||| Sbjct 442609 AAGCAGCGAGTTGCGGACACCGTGCTGAGCAATCTTGGCCTTCAATTCTGCCCAGTCCCA 442550 Query 147072 CA--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGA 147129 | ||| | ||||| || ||||||||||| ||||| || | || | |||| Sbjct 442549 GAGATCG--GTAGGCGTGACATTCCACATGTCATACTGAAGAATACCCTGTGAAACGGGT 442492 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAAT-TCACAGCTTGCCTCGAG 147188 || || | || ||| | || || | | |||| ||||| | || Sbjct 442491 GATCCCTCGTAGGTCTCGTAAGTACCAA-GCTCCTTGGCAATATCACATGAGGAAGTAAG 442433 Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTC 147248 || ||| ||| ||||| ||| ||| || |||| || | || ||| | ||| Sbjct 442432 AGCAGCATGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCTGCCGACTC 442373 Query 147249 GTAAGGCATACGCAGAAGC-ACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAG 147307 | | |||| |||| | || | || |||||||||| ||| || | ||| | || || | Sbjct 442372 GAATGGCAGGCGCA-ATGCGAGGAAAGCATCGGCCAGACCTTGCACACCCATACCAATGG 442314 Query 147308 GTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAA 147367 |||| || ||||||||| || | | | ||| ||||||||| |||||| | Sbjct 442313 GTCGGTGACGGAAGTTGCTGCGGCGTGCCTCCTCGACGGGGTAGTGGTTGACATCAATGA 442254 Query 147368 TCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAG 147427 ||||||| | ||| || ||||| | || | | ||| |||| ||| ||| || Sbjct 442253 TCTTGTTCAAGTTGCGGGTGACAACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCA-AAC 442195 Query 147428 TCCC-------GTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAG 147480 || | || |||||| | | | || || || | || ||||| ||||| Sbjct 442194 TCGCCACGCTTGTAGTCGACAA--AGGAA--GG--CAGAGCAAGGGAAGCCAGGTTGCAA 442141 Query 147481 ACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTG---CTGCAT 147537 || || ||| || | | |||||| || || || | ||||| |||| |||| Sbjct 442140 ACAGCAACCTCATCAGGAGCAGTGTACTCAACAATCTCTGTGCACAAGTTGGAGCTGCGA 442081 Query 147538 TTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATG 147597 | || ||||| || | ||| ||||| || || ||||| || || ||| ||||||| Sbjct 442080 ATAGTG---CCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATA 442024 Query 147598 TACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCT 147654 | || || || ||| || | || | ||| | ||| || | ||| || Sbjct 442023 AAGGGGTTACCAGTTTCGGTCTGGGCCTCGAGGATGGCATACCAG---AGTTTCTGGGCG 441967 Query 147655 CGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCG 147714 || || || || | || || ||||| | |||||||| ||| |||||| Sbjct 441966 CGAACAGTCTCACGGCCCTTGTTCTGCTTCTCGTAGCTCTCGTACAGTGCCTCGAACTCG 441907 Query 147715 TCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCG 147774 || |||||| ||||| || || || || | || ||| ||||| || | ||| | | Sbjct 441906 TCACCGTAGACGTCGGCGAGACCAGGGCATTCATTCGGGCACATGAGAGTCCATTCGCCA 441847 Query 147775 TCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGC 147834 | | | | || || ||| || || || || | |||||| ||||| | ||||| || Sbjct 441846 TTCTCTTGGACACGCTTCATGAAAAGGTCTGGAATCCACAGAGCGTAGAAGAGATCACGA 441787 Query 147835 GCTTTGCAATCCTCGGCGC--CCATGTTGCGTTTCAAA--TTAAGCACGCTATAGATGTC 147890 || || | |||| | || || | | || | | | || | || | ||| || Sbjct 441786 GC---GCGAACCTCCTCCTTGCCGTGGTTC-TTGCGGAGGTCGAGGAAGCCAAAGACATC 441731 Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTC 147947 |||||||| || |||| ||||| || | ||||| |||||| || |||||||| Sbjct 441730 AGCGTGCCATGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTGCCACCCTGGTC 441671 Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCC 148007 ||| | ||| || ||||||| | || || | ||| || || ||| | | || || Sbjct 441670 GACGTAGCGAGCCGTGTTGTTGTATACACGGAGCATAGGAATGAGACCGTTTGACGTTCC 441611 Query 148008 GTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCC 148067 ||||||| || | |||| ||| || | | ||| ||||| | |||||| || Sbjct 441610 GTTGGTGCCGCCAATGTATGAGCCGGTGGCACGGATTCGGTGGACGTTGAGGCCAATACC 441551 Query 148068 GCCGCCGTACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATGCCGTCGATG 148125 ||| || ||| || || || ||| | | | ||| |||||||||||| ||| Sbjct 441550 GCCAGCGGTCTTGGAGAT--CAAGGCACATGTCTTGAGTGTGTCGTAGATGCCGTCAATG 441493 Query 148126 CTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCC 148185 ||||| | || | | | | | || || ||| |||| || || | || || || Sbjct 441492 CTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGTGATGGAGTACCTGCG 441433 Query 148186 GAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCA 148245 ||| || || || ||||| || || | ||||| ||| | || |||||| Sbjct 441432 TTGAATAGCGTCGGTGAAGCGTGTGTGAAGTACTTTTGTGACATGTAGTCGTAGGTCTCA 441373 Query 148246 ATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGT 148305 || || | ||||| || || ||||| || || | ||||| |||||||||||||| ||| Sbjct 441372 ATGGCCTTCTCGATATCCTCACCGTGGATACCGACAGCGACACGCATGAGCATGTGTTGT 441313 Query 148306 GGTCGTTCGGCAAC 148319 || || || ||||| Sbjct 441312 GGGCGCTCAGCAAC 441299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610389760960