Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq46 100 3e-16 seq49 95.1 1e-14 >seq46 Length=533260 Score = 100 bits (110), Expect = 3e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | ||| |||||| | || | ||| |||||||||||||| ||||| Sbjct 196958 GCTCGACCAGGTTCTCGTTGACGATGCCATCCGAGGCGGCGAAAAAGGCGAGGACGTGGG 196899 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | |||||||| ||||||||||| | || |||||||| | Sbjct 196898 AGATGAAGAAGCGCTCGTCATCGTTCAGGCGCTTGTTCCAGTCGTGAAGATCCTTGGAGA 196839 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCA 110886 || ||||||||| | ||||| | || | | |||||||||||| |||||| Sbjct 196838 GATCAATCTCTTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCA 196784 >seq49 Length=2757401 Score = 95.1 bits (104), Expect = 1e-14 Identities = 181/264 (69%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 138142 ACGTTGAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTCTA 138201 ||||||||||| || ||||| || || || |||| |||||| ||||| || Sbjct 441567 ACGTTGAGGCCAATACCGCCAGCGGTCTTGGAGATCAAGGCACATGTCTTGAGTGTGTCG 441508 Query 138202 TAGATGCCGTTTATGCTGTCTTCCTGGATGTTGAGTAGATAACACGACGACATTTGAGGC 138261 |||||||||| |||||||| |||| |||| || || | || || ||||| ||||| Sbjct 441507 TAGATGCCGTCAATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGAAGACATCTGAGGT 441448 Query 138262 ATTTTCATGCCAGCCGAGAATAGAGTGGGACTAGCGTGGGT-AAACATTTTCGAGCGCAT 138320 | | || || |||||| || || |||||| || || | ||| | | ||| Sbjct 441447 GATGGAGTACCTGCGTTGAATAGCGTCGGTGAAGCGTGTGTGAAGTACTTTTGTG-ACAT 441389 Query 138321 CAATCTATATGACTCGATCGCACTCTCGATATCATCACCATGAATCTGAAGAGCGACACG 138380 | || | ||| || || |||||||||| ||||| || || | ||||||||| Sbjct 441388 GTAGTCGTAGGTCTCAATGGCCTTCTCGATATCCTCACCGTGGATACCGACAGCGACACG 441329 Query 138381 CATCAGCATGTGTTGAGGTCTCTC 138404 ||| ||||||||||| || | ||| Sbjct 441328 CATGAGCATGTGTTGTGGGCGCTC 441305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093643339520