Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq46 147 3e-29 seq49 118 2e-20 seq47 98.7 1e-14 >seq46 Length=533260 Score = 147 bits (162), Expect = 3e-29 Identities = 210/292 (72%), Gaps = 13/292 (4%) Strand=Plus/Plus Query 1455779 TGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGG 1455838 ||| |||||||| || ||||||||||| || || ||||||||||| ||| | || ||| Sbjct 196784 TGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAAGAGATTGATCTCTC 196842 Query 1455839 CGCCGA----CACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891 | || |||| ||||| || ||| ||| ||||||||| |||||| Sbjct 196843 CAAGGATCTTCACG----ACTGGAACAAGCGCCTGAACGATGACGAGCGCTTCTTCATCT 196898 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 |||||||||||||||| |||||||| ||||||||||| ||||||||||| || Sbjct 196899 CCCACGTCCTCGCCTTTT-TCGCCGCCTCGGATGGCATCGTCAACGAGAACCTGGTCGAG 196957 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || | || || ||| | || ||||| |||| || || || ||||||||| Sbjct 196958 CGTTTCTCCAGCGAAGTACAAATACCGGAGGCGCGTTGTTTCTATGGTTTCCAGATCATG 197017 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCA 1456063 || || || ||||||| || || ||||| || || |||||||| ||| ||| Sbjct 197018 ATGGAGAATGTCCACTCGGAGACTTACTCTCTGCTCATCGACACATACATCA 197069 Score = 107 bits (118), Expect = 3e-17 Identities = 188/267 (70%), Gaps = 5/267 (2%) Strand=Plus/Plus Query 1456515 CCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGC 1456574 |||||| |||||| ||||| ||| |||| ||| ||||||| ||||||| |||| | Sbjct 197432 CCAAGCC-ATCATCACTGAGGCTGTCCAGATTGAGCAAGAGTTCCTCAGCGACGCGCTAC 197490 Query 1456575 CGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGC 1456634 | || || ||||||||||||||| |||||||||||||||||||| | || || || Sbjct 197491 CCTGTGCTCTGCTCGGCATGAACGCCA-AGCTCATGTGCCAGTACATTG-AGTTCGTTGC 197548 Query 1456635 CGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCC 1456694 || || |||| || || ||| | ||| ||||| | ||||||| || Sbjct 197549 TGATCGTTTGCTGCTCGCTCTGGGCAAC-ACCAAGGTCTACCACGCCACCAACCCCTTTG 197607 Query 1456695 CATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCG 1456753 | |||||| |||||||| | |||||||||||||| |||||| || | ||| | Sbjct 197608 ACTTCATGGAGAACATCTCGCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTG 197667 Query 1456754 AGTACGCCAAGGCCGGCGTCACCGCCA 1456780 | ||| || || || |||| |||| Sbjct 197668 ACTACCAGAAAGCTGGTGTCATGGCCA 197694 >seq49 Length=2757401 Score = 118 bits (130), Expect = 2e-20 Identities = 206/300 (69%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942 |||||||| |||||| || ||| ||||| || | || ||||| || || || Sbjct 441377 ACCTACGACTACATGTCACAAAAGTACTTCACACACGCTTCACCGACGCTATTCAACGCA 441436 Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002 || || || || |||| || || ||||| || | |||||||||| || || Sbjct 441437 GGTACTCCATCACCTCAGATGTCTTCCTGCTTCCTCATCGACATGAAGGAGGACAGCATT 441496 Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062 || |||||||| ||||| |||||| || || | ||||||||| | || ||||| || Sbjct 441497 GACGGCATCTACGACACACTCAAGACATGTGCCTTGATCTCCAAGACCGCTGGCGGTATT 441556 Query 260063 GGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAG 260122 || | || ||| | || ||| | ||| | ||| | | ||||||||||| | Sbjct 441557 GGCCTCAACGTCCACCGAATCCGTGCCACCGGCTCATACATTGGCGGCACCAACGGAACG 441616 Query 260123 TCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || ||||| || | || ||||| || || | ||| ||||||| ||||||||||||||| Sbjct 441617 TCAAACGGTCTCATTCCTATGCTCCGTGTATACAACAACACGGCTCGCTACGTCGACCAG 441676 >seq47 Length=469943 Score = 98.7 bits (108), Expect = 1e-14 Identities = 320/497 (64%), Gaps = 0/497 (0%) Strand=Plus/Plus Query 332852 TGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATG 332911 ||||| ||||| || || | | || |||||||| || | ||||| | ||||||| Sbjct 206120 TGGGCATCAGTAAGACGGGCGTATCGGAGGATGGCGCATCTTGATTGCAGCGGCTCGATG 206179 Query 332912 ACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATG 332971 | | | ||| ||| || || | ||| || ||||| || | | | |||||||| Sbjct 206180 ATCTTGTTGGACTGGTTACAAGCAAAGGCGAAGCGCGTAGTGGAGCTGTAGATTTCCATG 206239 Query 332972 GTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATG 333031 ||| || ||| ||||| || || | ||| | || ||| ||||||||||| |||| | Sbjct 206240 GTCCTCCTGAGCGCCTGCTGTGCACCACTCGTCATGCTGTCCGCCTCGTCGAGAATGACG 206299 Query 333032 ATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTG 333091 | ||| || | || | |||| ||| | ||| |||| |||||| ||| Sbjct 206300 AGCTTTTGTCTACCCGGGGGCAATGTGACCTTCTTCTGGGCGAAACCCTTGATGCGATTG 206359 Query 333092 CGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCG 333151 || || || || | || ||||| || || |||||||| ||||| ||||| || | | Sbjct 206360 CGGACAACATCAATACCACGCTCATCAGAGGCGTTGAGCTCGAGAACGGCTTCTTTGTAA 206419 Query 333152 GCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGC 333211 || | || | ||| ||| || ||||| |||| || || || || | || ||| Sbjct 206420 GCATCGCCAAGGAGTTGGCGGGCGAGGCAGAGGATGGAGGTTGTTTTTCCGATACCCGGC 206479 Query 333212 GGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCA 333271 || | | | | || |||||||||||||| ||| | ||||||| || Sbjct 206480 ATGCCGGATATGATCATGTGTGGCATGTTGCCGTCTTTGGCAATGATCTTGAGGCGCTCA 206539 Query 333272 ACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGATCCAT 333331 | || | ||||||||| | || ||||| | || ||||||||||| | || Sbjct 206540 ATGGTTTCTGTGTTGCCGACGACATCATCGAGGTAGACGGGACGGTACTTTTCTACCCTG 206599 Query 333332 GGGAGGCCAAAGTCGGC 333348 | |||| ||||||| Sbjct 206600 GACAGGCGTCAGTCGGC 206616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177798082550032