Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq93 129 6e-25 seq49 129 6e-25 >seq93 Length=1979483 Score = 129 bits (142), Expect = 6e-25 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| ||||| || || || || ||||| ||||||||||||||| | |||| | Sbjct 928288 AGGCGCAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGG 928347 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || || ||||||| ||||||||||| || || ||||| || Sbjct 928348 CCATCCTCAAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGAATGCCCTCC 928407 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || ||| ||||| ||| | ||||||||||| || || ||||| ||| Sbjct 928408 TTATCCTGGATCTTTGACTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCGAGCGTA 928467 Query 134676 ATGGTTTTACCGGT 134689 ||||| || ||||| Sbjct 928468 ATGGTCTTGCCGGT 928481 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || |||||||| || |||||||||||| | |||| || || || Sbjct 928580 ACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCATCCTCA 928639 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || ||||| |||||||| || || || ||||| || || || || Sbjct 928640 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 928699 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | |||||||| || || || || || || ||||| || Sbjct 928700 ATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTG 928759 Query 134685 CCGGT 134689 ||||| Sbjct 928760 CCGGT 928764 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || ||||| ||||| || ||||||||||| | || | Sbjct 927832 AGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGG 927891 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| || || ||||| || | ||||||||| || || || || || || Sbjct 927892 CCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 927951 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || ||||| ||| | |||||| ||||||||| || | || Sbjct 927952 TTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGATTCCACCTCCAACGTG 928011 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || || || |||||||| Sbjct 928012 ATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049 >seq49 Length=2757401 Score = 129 bits (142), Expect = 6e-25 Identities = 453/697 (65%), Gaps = 24/697 (3%) Strand=Plus/Plus Query 8253 CGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAG 8312 |||||| |||| || | ||||| ||||| || ||||||||| ||| ||||| || | Sbjct 442006 CGAAACTGGTAACCCCTTTATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAA 442065 Query 8313 CAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCC 8372 ||| ||||||| ||| | || ||| ||||| | || ||||| |||||| || || Sbjct 442066 GAACTTGGGCACTATTCGCAGCTCCAACTTGTGCACAGAGATTGTTGAGTACACTGCTCC 442125 Query 8373 CGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTTCGTTGATCGACG 8432 || || || || |||||||| || || || | | | || ||| || ||||| Sbjct 442126 TGATGAGGTTGCTGTTTGCAACCTGGCTTCCCTTGCTCT----GCCTTCCTTTGTCGACT 442181 Query 8433 CTCAAACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAGTGAC---GGTA----- 8484 ||| | | ||| ||||| | | || | || | | || || ||| Sbjct 442182 A-CAAGCG-TGGCGAGTTTGACT--TCCAGAAGCTCCACG-AGGTCACCCAGGTTGTCAC 442236 Query 8485 -CGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGC-GTAT 8542 ||||| || | |||||||||||||| || ||| | || || || ||| | | Sbjct 442237 CCGCAACTTGAACAAGATCATTGATGTCAACCACTACCCCGTCGAGGAGGCACGCCGCAG 442296 Query 8543 CGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCA 8602 | ||| | || ||| ||||| |||| |||| ||||||||||||||||| || || | Sbjct 442297 C-AACTTCCGTCACCGACCCATTGGTATGGGTGTGCAAGGTCTGGCCGATGCTTTCCTCG 442355 Query 8603 TGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAA 8662 |||||||| || | ||| ||| || | ||||||||| | || || | Sbjct 442356 CATTGCGCCTGCCATTCGAGTCGGCAGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGA 442415 Query 8663 CGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTACG 8722 | | || | | || | || ||| | ||||| || | || || |||| Sbjct 442416 CCATCTACCATGCTGCTCTTACTTCCTCATGTGATATTGCCAAGGAGCTTGGTACTTACG 442475 Query 8723 AATCGTACGCGGG--CAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGT 8780 | | |||| ||| || || | || | || || | || || |||||||||||||| Sbjct 442476 AGACCTACGAGGGATCACCCGTTTCA--CAGGGTATTCTTCAGTATGACATGTGGAATGT 442533 Query 8781 CACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTT 8840 |||||| ||| | | ||| | ||| || ||||| ||| |||||||| |||| | Sbjct 442534 CACGCCTACCGATCTCTGGGACTGGGCAGAATTGAAGGCCAAGATTGCTCAGCACGGTGT 442593 Query 8841 GCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAA 8900 ||||| |||||| | | || |||||| || ||| ||||| | || || | ||||| Sbjct 442594 CCGCAACTCGCTGCTTATCGCACCCATGCCAACTGCCTCGACTTCCCAGATTCTCGGAAA 442653 Query 8901 CAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937 ||| || | ||| ||||| | |||| |||| | ||| Sbjct 442654 CAATGAGTGCTTCGAGCCCTACACCTCCAACATCTAC 442690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397540822720