Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq93 141 3e-28 seq48 96.9 1e-14 seq43 96.9 1e-14 >seq93 Length=1979483 Score = 141 bits (156), Expect = 3e-28 Identities = 544/849 (64%), Gaps = 13/849 (2%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| || ||||| ||| | || || || || || || |||| | | | | |||| | Sbjct 313200 CCGCGATCGGAATTGATCTTGGAACCACATACTCGTGCGTTGGCATCTTCCGAGATGACC 313141 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | || || ||||| || || || |||||| | ||||| || || | |||||| |||| Sbjct 313140 GCATTGAGATCATTGCCAACGACCAGGGTAACCGCACAACACCCTCGTTCGTTGCCTTTA 313081 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || ||||| || ||||| || || | || || || | | Sbjct 313080 CCGACACCGAGCGTCTCATCGGTGACTCGGCAAAGAACCAGGTCGCCATGAACCCCACCA 313021 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || ||||| ||||| || |||||| | | || | ||| | || Sbjct 313020 ACACCGTCTTCGATGCCAAGCGCCTCATTGGTCGCAAGTTCGCCGACGCTGAGGTC---- 312965 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || | || | || || || || || | || | | | ||| || | || || | Sbjct 312964 CAGGCCGACATGAAGCACTTCCCCTTCAAGGTCAT-CGACAAG--GGCGGCAAGCCCGTC 312908 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 || |||| || | || || || | || || ||| || || || || || ||| Sbjct 312907 ATCCAGGTCGAGTTCAAGGGCGAGGAGAAGACCTTCACACCAGAGGAGATCTCCTCCATG 312848 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 || | || |||| ||||| || || | || | |||| || || | | || Sbjct 312847 GTCCTGACCAAGATGAGGGAAACCGCAGAGTCGTACCTCGGTGGCACCGTCAACAACGCC 312788 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || | ||||| |||||||| || || || | || ||| || || || |||||||| Sbjct 312787 GTCGTCACTGTCCCAGCCTACTTCAACGACTCACAACGTCAGGCCACCAAGGATGCTGGT 312728 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 ||| || || | || || || | || || || || ||||| || || || ||||| Sbjct 312727 CTCATCGCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACCGCCGCTGCCATTGCC 312668 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || || | || | || || | || || || ||| | |||||| Sbjct 312667 TACGGTCTCGACAAGAAGACCCAGGGCGAGCGCAACGTCCTCATCTTCGATCTTGGTGGT 312608 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| || ||||| || || || || | || ||||| || || || || || | ||| Sbjct 312607 GGTACCTTCGATGTCTCTCTCCTTACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCACT 312548 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 || ||||| ||||| | ||||| || || || || || ||||| || || || Sbjct 312547 GCCGGTGACACACACTTGGGTGGTGAGGACTTCGACAACCGTCTTGTGAACCACTTCACC 312488 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 ||||||| |||||| |||| || | || || || || | || | || || Sbjct 312487 CAAGAATTCAAGCGT-AAGCACAAGAAGGACCTTACCACCAACGCTCGCGCCCTTCGCCG 312429 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || |||| || || || ||||| ||||| | | || ||| || | || || || || Sbjct 312428 TCTCCGAACCGCTTGCGAGCGTGCCAAGCGCACTCTGTCTTCTTCTGCGCAGACTTCGAT 312369 Query 350032 TGAAATTGA 350040 ||| ||||| Sbjct 312368 TGAGATTGA 312360 Score = 131 bits (144), Expect = 5e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | |||||||| ||||| || || || || | Sbjct 928043 TTTGCATACCACCACGCAGACGGAGCACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGT 928102 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| | || || || ||||| ||||| ||||| || || || || || ||||| | Sbjct 928103 AATCAGAGAGAGTACGGCCGTCTTCCAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGGT 928162 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| || || ||||| ||||| || | || || || ||||| | ||| || | Sbjct 928163 CTGGGGGAATACCCTCCTTATCTTGAATCTTGGACTTGACGTTGTCAATAGTATCCGAAG 928222 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | |||||||| || | || || || || |||||||| Sbjct 928223 ACTCCACCTCTAGAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 928277 Score = 131 bits (144), Expect = 5e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | | || ||||| ||||||||||| || ||||| || || || Sbjct 928275 CATACCACCACGCAGGCGCAAGACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTC 928334 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||| || || ||||| ||||| || ||||| || || || || || |||||||| || Sbjct 928335 GGATAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGG 928394 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || |||||||| || || | || || || ||||| | || || | || Sbjct 928395 GGGAATGCCCTCCTTATCCTGGATCTTTGACTTGACGTTGTCAATGGTGTCGGACGACTC 928454 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713 ||| || || |||| ||||| ||||| Sbjct 928455 AACCTCGAGCGTAATGGTCTTGCCGGT 928481 Score = 102 bits (112), Expect = 2e-16 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563 |||| ||| ||||||| | || || | || || || ||||| || || || || || Sbjct 927816 TTACTGACCGCCACGTAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTA 927875 Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623 || || | || || || |||||||| || || ||||||||||| ||||| ||||| || Sbjct 927876 GTCCGAGAGCGTCCGGCCGTCTTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTC 927935 Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 || || || || || || |||||||| || | || || || || || | || | Sbjct 927936 CGGGGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGA 927995 Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || | || | ||||| ||||| || || || ||||| || ||||| Sbjct 927996 TTCCACCTCCAACGTGATCGTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049 Score = 89.7 bits (98), Expect = 2e-12 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| || || || || || || || || Sbjct 928558 CATACCACCACGAAGGCGGAGGACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTC 928617 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || || || ||||| | || ||||| || || Sbjct 928618 GGACAGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGG 928677 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 || || || || || ||||| || || ||| || ||||| || || | || || | | Sbjct 928678 GGGGATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACATTGTCGATGGTGTCGGAGGACT 928736 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || ||||| || | ||||| ||||| Sbjct 928737 CGACCTCAAGGGTGATGGTCTTGCCGGT 928764 >seq48 Length=384450 Score = 96.9 bits (106), Expect = 1e-14 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | ||||| || || || || ||||| || || || || || || Sbjct 121949 ATACCACCACGGAGACGGAGAACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCG 122008 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| || ||||| |||||||| ||||| ||||| ||||| || || Sbjct 122009 GAAAGGGTGCGACCATCCTCGAGTTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGG 122068 Query 140628 GGAATTCCTTCTTTATCCTGAATTTT 140653 ||||| || || || ||||| || || Sbjct 122069 GGAATGCCCTCCTTGTCCTGGATCTT 122094 >seq43 Length=1231009 Score = 96.9 bits (106), Expect = 1e-14 Identities = 105/139 (76%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 |||||||||||| ||||||| ||| || || | ||||||||||| ||||| || || Sbjct 394993 CGTGGCACACCAAGTGTAACGTTC---TTGGAAGACACACCAGCAAAATGGAAGGTGTTG 395049 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | || |||| |||||||| || || || ||||||| || || ||||| || Sbjct 395050 AGCGTCATCTGCGTAGCAGGCTCACCGATGGATTGGGCTGCAAGCACACCGACCATCTCA 395109 Query 377578 CCAGGATTGACAATAGCCT 377596 |||||| |||| ||||| Sbjct 395110 CCAGGAGCGACAGCAGCCT 395128 Score = 87.8 bits (96), Expect = 5e-12 Identities = 110/148 (74%), Gaps = 6/148 (4%) Strand=Plus/Minus Query 266973 ATCGGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTACGATTAT-TCC 267031 || || ||||| ||| || ||| ||||| ||||||||||||||||||| ||| | | Sbjct 646051 ATTGGTGATAAGTTTGCTTCTCGTCACGGTCAAAAAGGTACCATTGGTA---TTACCTAC 645995 Query 267032 TGA--AGAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCT 267089 || |||| | ||||| || | ||| ||| | | ||| ||| | |||||||| ||| Sbjct 645994 CGACAAGAAGACATGCCTTTCACCAGAGAGGGAGTGACACCAGATCTAATTATTAACCCT 645935 Query 267090 CATGCTATTCCTAGTCGTATGACAATTG 267117 || || ||||| |||||||||||||| Sbjct 645934 CACGCCATTCCATCTCGTATGACAATTG 645907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515251759669208