Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq49 259 5e-64 seq93 87.8 2e-12 seq46 84.2 2e-11 >seq49 Length=2757401 Score = 259 bits (286), Expect = 5e-64 Identities = 420/595 (71%), Gaps = 12/595 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| ||||| | |||||||||||||| || | | | | |||||| |||| Sbjct 441324 TCATGCGTGTCGCTGTCGGTATCCACGGTGAGGATATCGAGAAGGCCATTGAGACCTACG 441383 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 ||| ||| ||||||||||| || ||||| | || || || |||||||| ||||| Sbjct 441384 ACTACATGTCACAAAAGTACTTCACACACGCTTCACCGACGCTATTCAACGCAGGTACTC 441443 Query 53313 -ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 |||||| ||||||||| ||||||||| | | |||||||| ||| || |||||| Sbjct 441444 CATCACC-TCAGATGTCTTCCTGCTTCCTCATCGACATGAAGGAGGACAGCATTGACGGC 441502 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| || |||||| |||||| ||||||||| | || ||||| || || Sbjct 441503 ATCTACGACACACTCAAGACATGTGCCTTGATCTCCAAGACCGCTGGCGGTATTGGCCTC 441562 Query 53432 CACTGCT--CGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCGC 53487 || | |||| ||||||| | |||| || || || || ||||| |||| Sbjct 441563 AACGTCCACCGAA--TCCGTGCCACCGGCTCATACATTGGCGGCACCAACGGAACGTCAA 441620 Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547 | || || | ||||||||||| || | |||||||||||| || |||||| ||||||| Sbjct 441621 --ACGGTCTCATTCCTATGCTCCGTGTATACAACAACACGGCTCGCTACGTCGACCAGGG 441678 Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607 ||| ||||| ||| | || || |||||||| ||||| |||||||| || | | Sbjct 441679 TGGCAACAAGCGTCCGGGTGCCTTTGCTATCTACCTTGAGCCATGGCACGCTGATGTCTT 441738 Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT 53667 | || ||||| || || ||| || || | || ||| | ||| ||||| || || Sbjct 441739 TGGCTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCTCGTGATCTCTT 441798 Query 53668 -TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGT 53726 ||| |||||||||||||| ||||| |||||| | || | || | | || ||| Sbjct 441799 CTAC-GCTCTGTGGATTCCAGACCTTTTCATGAAGCGTGTCCAAGAGAATGGCGAATGGA 441857 Query 53727 ACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 || ||||||||||| || ||||| || ||| | ||||||||||| ||||| Sbjct 441858 CTCTCATGTGCCCGAATGAATGCCCTGGTCTCGCCGACGTCTACGGTGACGAGTT 441912 Score = 111 bits (122), Expect = 2e-19 Identities = 298/447 (67%), Gaps = 9/447 (2%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| ||||| | || || |||||||| || ||||| | ||||| | || ||| Sbjct 442595 CGCAACTCGCTGCTTATCGCACCCATGCCAACTGCCTCGACTTCCCAGATTCTCGGAAAC 442654 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 || ||| |||||||| ||||| ||||||||||| ||||| || || |||||| Sbjct 442655 AATGAGTGCTTCGAGCCCTACACCTCCAACATCTACTCTCGCCGTGTACTCGCGGGTGAG 442714 Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663 || | ||||| | |||||||||| | || | |||| | | Sbjct 442715 TTCCAAGTTGTCAACCCATGGTTGCTCAAGGACCTTGTCGACATGGGCCTGTGGTCCGAG 442774 Query 55664 CAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGT--CCAGAATCTGGAG-ATTC 55718 | || |||| || || | || ||| || || ||| | | |||||| | || | Sbjct 442775 AACATGAAGAACCGCATCATC-GCTGAA-GGCGGTTCCATTGCAAGAATCCCCAACATCC 442832 Query 55719 CTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTC-TGATT 55777 || | |||| | ||| ||| || ||||| || | || | || | | ||| Sbjct 442833 CTGAGGAAACCAAGACCCTCTACAAGACTGTTTGGGAAATCTCGCA-ACGAACCATTATT 442891 Query 55778 GACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG 55837 | ||| |||||| |||||||| | ||| || ||||| ||||| ||||||||| |||| Sbjct 442892 CAGATGGCTGCTGACCGTGGTGCCTTCATTGATCAGTCACAGTCACTGAACATCCACATG 442951 Query 55838 GAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTC 55897 || | || | ||| |||| | | || ||||||||| ||| |||||| || ||| Sbjct 442952 AAGGAGCCAACCATGGGCAAGATCACTTCCATGCACTTTGCCGGATGGAAGCTTGGTCTC 443011 Query 55898 AAGACGGGTATGTACTATCTGCGGACC 55924 |||||||| |||||||| || || ||| Sbjct 443012 AAGACGGGCATGTACTACCTCCGTACC 443038 >seq93 Length=1979483 Score = 87.8 bits (96), Expect = 2e-12 Identities = 206/303 (68%), Gaps = 10/303 (3%) Strand=Plus/Plus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| | |||||||||||| || ||||| |||| || ||||||||||| || Sbjct 297804 GTTGATCAGCAAGCCCTTGATATGGCTACCGTCGTGATCTTGATCCGTCATGATCATGAG 297863 Query 152829 ACGACCGTAGCGCAGG----TCACGT-AGTGACCCGTAGAC-CTTTC-CATGTTGAAGCC 152881 | | ||||| |||| | ||| || || | ||||| || ||||| ||||||||| | Sbjct 297864 ATGCCCGTATCGCAAGCTCTTCATGTCAGCCA-CCGTATACTCTTTCTTATGTTGAAGAC 297922 Query 152882 CGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCAT 152941 | | || ||||||| ||| || || | || | | | ||| | || ||||||| Sbjct 297923 CCATGAATTTTTTGATGTTCTGAATCTCGGCGTTCTTCATGATCTGATCGACAGTGGCAT 297982 Query 152942 CCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAA 153001 | || |||||| | | || || ||||| || || ||||| ||| || | || | Sbjct 297983 CGCGGACATTGAGGAGTTTACCACGGAGCGGGAAGACGCCAAACAAGTCCTGATTGACGA 298042 Query 153002 C-GCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTA 153060 | || | | || |||| ||||| | | ||||| |||||||| |||| ||||| || Sbjct 298043 CAGCAC-GTCCAGCAAGCGCAAGCACACTAGCCGACTCACCCTCAGTGAGGATAAGGGTG 298101 Query 153061 CAG 153063 ||| Sbjct 298102 CAG 298104 >seq46 Length=533260 Score = 84.2 bits (92), Expect = 2e-11 Identities = 170/249 (68%), Gaps = 5/249 (2%) Strand=Plus/Minus Query 75022 TGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGT 75081 |||| || | || ||||| |||||||| || | ||| | | |||| | | | Sbjct 197060 TGTCGATGAGCAGAGAGTAAGTCTCCGAGTGGACATTCTCCATCATGATCTGGAAACCAT 197001 Query 75082 AGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCA 75141 ||||| | |||||||| | || ||||| || | || ||| | | | | ||||| Sbjct 197000 AGAAACAACGCGCCTCCGGTATTTGTACTTCGCTGGAGAAACGCTCGACCAGGTTCTCGT 196941 Query 75142 TGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGC---T 75198 |||||||||| ||||||||||||||||| || || || ||| ||| |||| | Sbjct 196940 TGACGATGCCATCCGAGGCGGCGAAAAAGGCGAGGACGTGGGAGATGAAGAAGCGCTCGT 196881 Query 75199 CATCG-TCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACC 75257 ||||| |||| | | |||| ||| || | || ||| | | ||||||||| ||| | Sbjct 196880 CATCGTTCAG-GCGCTTGTTCCAGTCGTGAAGATCCTTGGAGAGATCAATCTCTTCGGCG 196822 Query 75258 GTCCAGAAA 75266 ||||||||| Sbjct 196821 GTCCAGAAA 196813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215069732800