Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq35 109 4e-19 >seq35 Length=1298611 Score = 109 bits (120), Expect = 4e-19 Identities = 415/646 (64%), Gaps = 49/646 (8%) Strand=Plus/Minus Query 29852 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCT 29911 ||||| | ||| ||||| || |||| || |||| || ||||||||||| ||||| Sbjct 939635 GGCTCACGCTCCAGCTGCACTTTGAGCGCATCGACGTGGTCGAGGTAGACGTGGGCGTCG 939576 Query 29912 CCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 29971 |||| | |||| ||| |||||| || || || ||||||| ||||| ||| Sbjct 939575 CCCATGGTGTGTGTAAAAGTGCCCGGTGTCAGGTCGCACACATGAGCCAGCATGTGGGTG 939516 Query 29972 AGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGG 30031 || || | || || ||||| || || || |||||||||||||| | ||| | |||| Sbjct 939515 AGTAGCGCATACGACGCAATGTTGAACGGCACGCCGAGCCCCATGTCGCACGAGCGCTGG 939456 Query 30032 TA---GAGCTGACACGAGA---------------GCTCTCC------GTCGC-------- 30059 || |||| | ||| |||| || || || Sbjct 939455 TACAAGAGCGAGTGCAAGACGCCCCTGGGGCGCTGCTCGCCCTGCTTGTGGCCTGGAAAA 939396 Query 30060 -TCACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 30115 | ||||||||||| | ||||| ||||| || || || ||||| | || Sbjct 939395 CTGACGTAAAACTGGGCAAACATG---TGGCAAGGCGGCAGGGCCATTTTCTTGATATCG 939339 Query 30116 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCC 30175 |||||||| |||| | |||||||||| ||| | || |||||| ||| ||| Sbjct 939338 GCCGGGTTCCACGCGCTGAGAATGATGCGCCGGTCGTACGGCTTGTTCTTGAGCTTGTCG 939279 Query 30176 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT-GTA 30234 | | | | || || || || ||| || | |||||| | | | || || | ||| Sbjct 939278 ATGATCTCTGCGAGTTGGTCGACGCCCTCGCCTGTGTAGTC-GTGCGCGTGGCCCTTGTA 939220 Query 30235 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294 ||||| || || |||| ||| ||||| ||||| || || ||||| || || ||||| Sbjct 939219 TTCTGCGCCAAAGTGCCGCCATTGGAAGCCGTAGACGGGGCCCAGCTCGCCTTCTTCGTA 939160 Query 30295 GTGCTCGA-AGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30352 |||| || || ||| | |||| | | || | | |||||| ||||||||||||| Sbjct 939159 GTGC--GATAGTCCCACGCTGTCGAGGTACTCGCGGCTGCCGTTGCCGTCCCAGATCTTG 939102 Query 30353 ACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30412 | || || ||||| ||| || |||| ||| |||||||| || ||||| Sbjct 939101 ATGCCTGCGTCGGAGAGGGACTTGCTGTGTGTGCTGCCTGCAACGAACCAGAGTAGCTCG 939042 Query 30413 TCCACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGG 30456 | | |||||| | || ||||| | |||||| ||||||||||| Sbjct 939041 CCAATGACGGCA--CGAAGGAAGACGCGCTTGGTGGTGAGGAGGGG 938998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309726540512