Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq93 118 9e-22 seq2 86.0 5e-12 >seq93 Length=1979483 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| | || ||||| || ||||| | || Sbjct 928277 ATGCAGATCTTCGTCAAGACGTTGACTGGAAAGACCATCACTCTAGAGGTGGAGTCTTCG 928218 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || |||||||| || || || || || || || || Sbjct 928217 GATACTATTGACAACGTCAAGTCCAAGATTCAAGATAAGGAGGGTATTCCCCCAGACCAG 928158 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || ||| |||||||| | || | || ||||||||| Sbjct 928157 CAGCGCCTGATTTTCGCCGGAAAGCAACTGGAAGACGGCCGTACTCTCTCTGATTACAAC 928098 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || ||||| | ||| |||| ||||| || Sbjct 928097 ATCCAGAAGGAGTCGACTCTTCACTTGGTGCTCCGTCTGCGTGGTGGTAT 928048 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||||||| | ||||| || || || || |||||||| | ||||| | ||||| | Sbjct 928481 ACCGGCAAGACCATTACGCTCGAGGTTGAGTCGTCCGACACCATTGACAACGTCAAGTCA 928422 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || || || || || ||||| || || ||||| ||||| | || | |||||| || Sbjct 928421 AAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATTTTCGCCGGAAAG 928362 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || | || || | ||| | ||||| ||||||||||| |||||||| || | ||| Sbjct 928361 CAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAGTCTACTCTGCAT 928302 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || ||||| |||| ||||| || Sbjct 928301 CTCGTCTTGCGCCTGCGTGGTGGTAT 928276 >seq2 Length=1714173 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139 |||||| || ||||| || || || || |||||| | || | ||||||||| || | || Sbjct 408879 AGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGA 408938 Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199 ||| | || |||| || |||||||| || |||||||||||| | || ||||| | Sbjct 408939 GGACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCT 408998 Query 27200 GCGTTTGCGGGGTGG 27214 ||| |||| ||||| Sbjct 408999 CCGTCTGCGTGGTGG 409013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917660638720