Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq93 118 9e-22
seq2 86.0 5e-12
>seq93
Length=1979483
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||| || ||| | || ||||| || ||||| | ||
Sbjct 928277 ATGCAGATCTTCGTCAAGACGTTGACTGGAAAGACCATCACTCTAGAGGTGGAGTCTTCG 928218
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| || |||||||| || || || || || || || ||
Sbjct 928217 GATACTATTGACAACGTCAAGTCCAAGATTCAAGATAAGGAGGGTATTCCCCCAGACCAG 928158
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| || ||| |||||||| | || | || |||||||||
Sbjct 928157 CAGCGCCTGATTTTCGCCGGAAAGCAACTGGAAGACGGCCGTACTCTCTCTGATTACAAC 928098
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||||||||| | || ||||| | ||| |||| ||||| ||
Sbjct 928097 ATCCAGAAGGAGTCGACTCTTCACTTGGTGCTCCGTCTGCGTGGTGGTAT 928048
Score = 111 bits (122), Expect = 1e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
||||||||| | ||||| || || || || |||||||| | ||||| | ||||| |
Sbjct 928481 ACCGGCAAGACCATTACGCTCGAGGTTGAGTCGTCCGACACCATTGACAACGTCAAGTCA 928422
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || || || || || ||||| || || ||||| ||||| | || | |||||| ||
Sbjct 928421 AAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAGCAGCGCCTGATTTTCGCCGGAAAG 928362
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| | || || | ||| | ||||| ||||||||||| |||||||| || | |||
Sbjct 928361 CAGCTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAGTCTACTCTGCAT 928302
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || ||||| |||| ||||| ||
Sbjct 928301 CTCGTCTTGCGCCTGCGTGGTGGTAT 928276
>seq2
Length=1714173
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 27080 AGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGA 27139
|||||| || ||||| || || || || |||||| | || | ||||||||| || | ||
Sbjct 408879 AGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGA 408938
Query 27140 AGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199
||| | || |||| || |||||||| || |||||||||||| | || ||||| |
Sbjct 408939 GGACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCT 408998
Query 27200 GCGTTTGCGGGGTGG 27214
||| |||| |||||
Sbjct 408999 CCGTCTGCGTGGTGG 409013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917660638720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |