Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq93 154 3e-32
seq48 105 2e-17
seq2 93.3 1e-13
seq49 87.8 4e-12
>seq93
Length=1979483
Score = 154 bits (170), Expect = 3e-32
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| ||||| ||||| || || || |||||||| || || | |||||
Sbjct 928567 ACGAAGGCGGAGGACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGT 928626
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || ||||||||||| |||||||| | ||| || ||||| || || | ||
Sbjct 928627 GCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCC 928686
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| ||||| || ||||||||||| ||| || ||||| ||
Sbjct 928687 CTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAG 928746
Query 211073 AGTGATCGTCTTTCCCGTGA 211092
||||| ||||| || ||||
Sbjct 928747 GGTGATGGTCTTGCCGGTGA 928766
Score = 141 bits (156), Expect = 2e-28
Identities = 161/215 (75%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || |||||||| || |||||||| || |||| || |||| || |||
Sbjct 927838 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGGCCGTCT 927897
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || ||||| || || || ||||| || || | || |||||||||
Sbjct 927898 TCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 927957
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079
|| ||||| || ||||| ||||||||||| ||| ||| ||||| | ||||||
Sbjct 927958 TGAATCTTCGACTTGACGTTGTCGATGGTGTC---GCTCGATTCCACCTCCAACGTGATC 928014
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || ||||| ||||| | |||||
Sbjct 928015 GTCTTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049
Score = 132 bits (146), Expect = 1e-25
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||| || || ||||| ||||| || || ||||| || || | ||||| | ||||| ||
Sbjct 928296 GACGAGATGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCCATCCTC 928355
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|||||||| || ||||| || ||||| || || || || |||| || ||||| |||||
Sbjct 928356 AAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTG 928415
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
||||||| || ||||| || |||||||| || ||||||||||| || || |||||
Sbjct 928416 GATCTTTGACTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCGAGCGTAATGGTCTT 928475
Query 211085 TCCCGTGA 211092
|| ||||
Sbjct 928476 GCCGGTGA 928483
>seq48
Length=384450
Score = 105 bits (116), Expect = 2e-17
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || || ||||| || |||||||| || || | |||||| | |||||
Sbjct 121967 AGAACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCC 122026
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || ||||| || |||||||| || || || ||||| || |||| || |||||||||
Sbjct 122027 TCGAGTTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 122086
Query 211023 TGGATCTT 211030
||||||||
Sbjct 122087 TGGATCTT 122094
>seq2
Length=1714173
Score = 93.3 bits (102), Expect = 1e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| || || ||||| || |||||||| || |||| ||| || | || ||
Sbjct 408998 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 408939
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| || || || ||||| || |||| || ||||||||
Sbjct 408938 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 408880
>seq49
Length=2757401
Score = 87.8 bits (96), Expect = 4e-12
Identities = 191/282 (68%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144
|| |||||||| ||||||||||| | ||||| ||||| ||||| || |||||
Sbjct 442074 CCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTAGAGCATAAAGGGG 442018
Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204
| || || | || ||| |||| ||| || ||| || | |||||| || ||||||
Sbjct 442017 TTACCAGTTTCGGTCTGGGCCTCGAGGATGGCATACCAGAGTTTCTGGGCGCGAACAGTC 441958
Query 178205 TTTTTG-GCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATA 178263
| | ||| | || | |||||||| | | ||| || ||||||| || || ||
Sbjct 441957 TCACGGCCCTTGTTCTGC-TTCTCGTAGCTCTCGTACAGTGCCTCGAACTCGTCACCGTA 441899
Query 178264 GACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTT 178323
||| || ||||||| || ||||| ||||| | |||| |||| | || | || |
Sbjct 441898 GACGTCGGCGAGACCAGGGCATTCATTCGGGCACATGAGAGTCCATTCGCCATTCTCTTG 441839
Query 178324 CACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|| || |||||||| ||||| | |||| | || |||||
Sbjct 441838 GACACGCTTCATGAAAAGGTCTGGAATCCACAGAGCGTAGAA 441797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159149980177640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |