Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq93 145 2e-29 seq57 114 3e-20 seq48 96.9 8e-15 >seq93 Length=1979483 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| ||||||||||| ||||| || |||| ||||| |||| || || Sbjct 928567 ACGAAGGCGGAGGACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGT 928626 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| | || || ||||| || || || || Sbjct 928627 GCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCC 928686 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||||||||| |||| || || || | Sbjct 928687 CTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAG 928746 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 928747 GGTGATGGTCTTGCCGGT 928764 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | |||||| ||||| || || |||| ||||| || | | || | || ||| Sbjct 927838 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGGCCGTCT 927897 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || || ||||| |||||||| Sbjct 927898 TCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 927957 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| | |||||| || |||||||||||| Sbjct 927958 TGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGATTCCACCTCCAACGTGATCGTC 928017 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | || | |||||| Sbjct 928018 TTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049 >seq57 Length=91387 Score = 114 bits (126), Expect = 3e-20 Identities = 192/272 (71%), Gaps = 7/272 (3%) Strand=Plus/Minus Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATA 7503 ||||||||||||| || ||| | ||| | || || ||| |||||| | | ||| Sbjct 20790 TTATATTTAATATATGCATTATTTGCAGGTTTAATTGGAACTGCTTTTTCTGTTTTAATA 20731 Query 7504 AGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATATTGAGTGGTAATAGCCAACTTTACAA 7562 || ||||| | | | || ||| ||| |||||| | | |||| ||| | || || Sbjct 20730 AGATTAGAGCTGTCAGGACCTGGTGTTCAGTATATTGCG-GATAAT---CAATTATATAA 20675 Query 7563 CGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGAT 7622 | ||||||||| || ||||| || |||||||||||||| | |||||||| | | | || Sbjct 20674 CAGTATTATTACTGCTCATGCTATTATTATGATTTTCTTTATGGTTATGCCAGCTTTAAT 20615 Query 7623 AGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATT-GGTGCTCCTGATATGGCTTTTC 7681 || || ||||| || | || |||| || | |||| || | |||||||||| || | Sbjct 20614 CGGTGGATTCGGTAACTTTTTACTTCCATT-AGGATTAGGAGGACCTGATATGGGATTCC 20556 Query 7682 CAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 | || ||||| |||||||||| | |||| || Sbjct 20555 CTAGACTTAATAATATAAGTTACTTATTATTA 20524 >seq48 Length=384450 Score = 96.9 bits (106), Expect = 8e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| |||| | || | ||||| Sbjct 121967 AGAACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCC 122026 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||||||||| || || || ||||| || ||||| || |||||||| Sbjct 122027 TCGAGTTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 122086 Query 225622 TGGATCTT 225629 |||||||| Sbjct 122087 TGGATCTT 122094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529122014384