Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05-
30] 136 sequences; 33,010,211 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq93 145 2e-29
seq57 114 3e-20
seq48 96.9 8e-15
>seq93
Length=1979483
Score = 145 bits (160), Expect = 2e-29
Identities = 151/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| ||||||||||| ||||| || |||| ||||| |||| || ||
Sbjct 928567 ACGAAGGCGGAGGACCAGGTGGAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGT 928626
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || |||||||| | || || ||||| || || || ||
Sbjct 928627 GCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCC 928686
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||||||| ||||||||||| |||| || || || |
Sbjct 928687 CTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCAAG 928746
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| |||||||| ||
Sbjct 928747 GGTGATGGTCTTGCCGGT 928764
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | |||||| ||||| || || |||| ||||| || | | || | || |||
Sbjct 927838 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTCCGGCCGTCT 927897
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| || || || ||||| || || ||||| ||||||||
Sbjct 927898 TCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 927957
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || ||||||||||| | |||||| || ||||||||||||
Sbjct 927958 TGAATCTTCGACTTGACGTTGTCGATGGTGTCGCTCGATTCCACCTCCAACGTGATCGTC 928017
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | || || | || | ||||||
Sbjct 928018 TTGCCGGTAAGGGTCTTGACAAAGATTTGCAT 928049
>seq57
Length=91387
Score = 114 bits (126), Expect = 3e-20
Identities = 192/272 (71%), Gaps = 7/272 (3%)
Strand=Plus/Minus
Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATA 7503
||||||||||||| || ||| | ||| | || || ||| |||||| | | |||
Sbjct 20790 TTATATTTAATATATGCATTATTTGCAGGTTTAATTGGAACTGCTTTTTCTGTTTTAATA 20731
Query 7504 AGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATATTGAGTGGTAATAGCCAACTTTACAA 7562
|| ||||| | | | || ||| ||| |||||| | | |||| ||| | || ||
Sbjct 20730 AGATTAGAGCTGTCAGGACCTGGTGTTCAGTATATTGCG-GATAAT---CAATTATATAA 20675
Query 7563 CGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGAT 7622
| ||||||||| || ||||| || |||||||||||||| | |||||||| | | | ||
Sbjct 20674 CAGTATTATTACTGCTCATGCTATTATTATGATTTTCTTTATGGTTATGCCAGCTTTAAT 20615
Query 7623 AGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATT-GGTGCTCCTGATATGGCTTTTC 7681
|| || ||||| || | || |||| || | |||| || | |||||||||| || |
Sbjct 20614 CGGTGGATTCGGTAACTTTTTACTTCCATT-AGGATTAGGAGGACCTGATATGGGATTCC 20556
Query 7682 CAAGGCTTAACAATATAAGTTTTTGATTACTA 7713
| || ||||| |||||||||| | |||| ||
Sbjct 20555 CTAGACTTAATAATATAAGTTACTTATTATTA 20524
>seq48
Length=384450
Score = 96.9 bits (106), Expect = 8e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| || || || || |||| ||||| |||| | || | |||||
Sbjct 121967 AGAACCAGGTGGAGTGTTGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGACCATCC 122026
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| ||||||||||| || || || ||||| || ||||| || ||||||||
Sbjct 122027 TCGAGTTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 122086
Query 225622 TGGATCTT 225629
||||||||
Sbjct 122087 TGGATCTT 122094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192529122014384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |