Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq35 122 6e-23 >seq35 Length=1298611 Score = 122 bits (134), Expect = 6e-23 Identities = 417/642 (65%), Gaps = 41/642 (6%) Strand=Plus/Minus Query 27118 GGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCT 27177 ||||| | ||| ||||| || |||| || ||||| || ||||||||||| ||||| Sbjct 939635 GGCTCACGCTCCAGCTGCACTTTGAGCGCATCGACGTGGTCGAGGTAGACGTGGGCGTCG 939576 Query 27178 CCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTG 27237 |||| |||||| ||| |||||| || || || ||||||| ||||| ||| Sbjct 939575 CCCATGGTGTGTGTAAAAGTGCCCGGTGTCAGGTCGCACACATGAGCCAGCATGTGGGTG 939516 Query 27238 AGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGG 27297 || || | || || ||||| || || || |||||||||||||| | ||| | |||| Sbjct 939515 AGTAGCGCATACGACGCAATGTTGAACGGCACGCCGAGCCCCATGTCGCACGAGCGCTGG 939456 Query 27298 TA---GAGCT-------GACAC-----GAGAGCT-CTCCATC-GCTTACGT-----AAAA 27335 || |||| ||| | | | ||| ||| | |||| | |||| Sbjct 939455 TACAAGAGCGAGTGCAAGACGCCCCTGGGGCGCTGCTCGCCCTGCTTGTGGCCTGGAAAA 939396 Query 27336 CTGACATAT-----GGC------GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 27384 ||||| || ||| |||||| || || || ||||| | || Sbjct 939395 CTGACGTAAAACTGGGCAAACATGTGGCAAGGCGGCAGGGCCATTTTCTTGATATCGGCC 939336 Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444 |||||||| |||| | |||||||||| ||| | || |||||| ||| ||| | | Sbjct 939335 GGGTTCCACGCGCTGAGAATGATGCGCCGGTCGTACGGCTTGTTCTTGAGCTTGTCGATG 939276 Query 27445 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCT 27504 | | || || || || ||| || | |||||| | | || |||| ||| Sbjct 939275 ATCTCTGCGAGTTGGTCGACGCCCTCGCCTGTGTAGTCGTGCGCGTGGCCCTTGTATTCT 939216 Query 27505 GCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 27564 || || || |||| ||||||||| ||||| || || ||||| || || ||||| |||| Sbjct 939215 GCGCCAAAGTGCCGCCATTGGAAGCCGTAGACGGGGCCCAGCTCGCCTTCTTCGTAGTGC 939156 Query 27565 TCGA-AGCCCCTCT-TGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 27622 || || ||| | |||| | | || | | |||||| ||||||||||||| | | Sbjct 939155 --GATAGTCCCACGCTGTCGAGGTACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGATGC 939098 Query 27623 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 27682 | |||||||| ||| || |||| ||| |||||||| || ||||| | | Sbjct 939097 CTGCGTCGGAGAGGGACTTGCTGTGTGTGCTGCCTGCAACGAACCAGAGTAGCTCGCCAA 939038 Query 27683 CGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGG 27722 |||||| | || ||||| | |||||| ||||||||||| Sbjct 939037 TGACGGCA--CGAAGGAAGACGCGCTTGGTGGTGAGGAGGGG 938998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506587541816