Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq49 131 2e-25 >seq49 Length=2757401 Score = 131 bits (144), Expect = 2e-25 Identities = 580/904 (64%), Gaps = 16/904 (2%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||||||||| |||||||| | | ||| || |||| || | || || ||||| Sbjct 441885 CCAGGGCATTCATTCGGGCACATGAGAGTCCATTCGCCATTCTCTTGGACACGCTTCATG 441826 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || || || || ||||| ||||| || ||||| || | | | || || || || Sbjct 441825 AAAAGGTCTGGAATCCACAGAGCGTAGAAGAGATCACGAGCGCGAACCTCCTCCTTGCCG 441766 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| || ||||| || | | | ||||| |||||||| || || || || Sbjct 441765 TGGTTCTTGCGGAGGTCGAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGATA 441706 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || || || || || ||||| || | || | || ||||| || || Sbjct 441705 GCAAAGGCACCCGGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAT 441646 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| ||||| | |||||| || ||||| || || || ||| || || Sbjct 441645 ACACGGAGCATAGGAATGAGACCGTTTGACGTTCCGTTGGTGCCGCCAATGTATGAGCCG 441586 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || || || | | | || || || || || |||| || || | || Sbjct 441585 GTGGCACGGATTCGGTGGACGTTGAGGCCAATACCGCCAGCGGTCTTGGAGATCAAGGCA 441526 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 || || | ||| |||||||| || || || ||||| ||| |||||| | || || Sbjct 441525 CATGTCTTGAGTGTGTCGTAGATGCCGTCAATGCTGTCCTCCTTCATGTCGATGAGGAAG 441466 Query 78375 CAGCTAGACATTTGA--TGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCG 78432 ||| |||||| ||| ||||| ||| ||||| || |||| ||||| || || || | Sbjct 441465 CAGGAAGACATCTGAGGTGATG--GAGTACCTGCGTTGAATAGCGTCGGTGAAGCGTGTG 441408 Query 78433 TAAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCC-CATTG 78490 | || | |||| || | |||| | ||| || ||||| || || || ||| || | Sbjct 441407 TGAAGTACTTTTGTGACATGTAG-TCGTAGGTCTCAATGGCCTTCTCGATATCCTCACCG 441349 Query 78491 ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATT 78550 || || || || || |||||||| | ||| || || || | ||| | ||| || Sbjct 441348 -TGGATACCGACAGCGACACGCATGAGCATGTGTTGTGGGCGCTCAGCAACCTTGCCATC 441290 Query 78551 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 78610 || | | |||||| |||| || || || || ||| | | ||| ||||| Sbjct 441289 GATGCGGAGGAGGTATGAGCGCTCCAGTGTCTTGAAGCCGAAAAACTGGTAGTTGAAGTC 441230 Query 78611 TCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGT-ATTTGGTAACAATATCCATGA 78669 || ||||| | ||| | || || || | ||| || || | | || || | | Sbjct 441229 TCGGTCGTATACTATAGCCGAGTTGAGCTCCTCTGCGTGATCTTG-AATGATCTTGTACA 441171 Query 78670 CAGTAGTTGAAATAATAGG--AGATCGTACACCATTTTTAGGATTAACATAGTTAAATAA 78727 | | | ||||| || || | || | || || || || || || ||||| | | Sbjct 441170 CGGAATCGGAAATCATGGGCTGGTTCTT--GCCGTTCTTGGGGTTGACGTAGTTGTAGAG 441113 Query 78728 ATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTAT 78787 ||| | || || |||| | || ||||| | |||||| ||||| ||||| || || Sbjct 441112 ATCCGATACGACTGCAGAAAATTGCTTCTTTGTCTGCTTGTGGAGATTTGATACTGCGAT 441053 Query 78788 TCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCTG 78846 | ||| || ||||| || ||||| ||||| |||| | || || ||||||| | || | Sbjct 441052 ACGTGCTGCCAGAATGGCGTAATCGGGATG-TGTGGTGGTCATGTAGGCTGCTGTCTCGG 440994 Query 78847 CCGC 78850 | || Sbjct 440993 CGGC 440990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667619063040