Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Curvularia_20sp._20IFB-Z10_20[genbank_20GCA_5F002161795.1_202017-05- 30] 136 sequences; 33,010,211 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq49 141 1e-28 >seq49 Length=2757401 Score = 141 bits (156), Expect = 1e-28 Identities = 392/589 (67%), Gaps = 14/589 (2%) Strand=Plus/Minus Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608 |||||| ||||||||||| ||||| | | ||| || |||| || | || || ||||| Sbjct 441886 ACCAGGGCATTCATTCGGGCACATGAGAGTCCATTCGCCATTCTCTTGGACACGCTTCAT 441827 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 || || || || ||||| ||||| || ||||| || | | | || || || || Sbjct 441826 GAAAAGGTCTGGAATCCACAGAGCGTAGAAGAGATCACGAGCGCGAACCTCCTCCTTGCC 441767 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 ||||| || || ||||| | | | ||||| |||||||| || || || || Sbjct 441766 GTGGTTCTTGCGGAGGTCGAGGAAGCCAAAGACATCAGCGTGCCATGGCTCAAGGTAGAT 441707 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | ||||||| || || || || ||||| || | || | || ||||| || || Sbjct 441706 AGCAAAGGCACCCGGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGCCGTGTTGTTGTA 441647 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 || | | ||| ||||| | ||||| || || || || || || ||| || || Sbjct 441646 TACACGGAGCATAGGAATGAGACCGTTTGACGTTCCGTTGGTGCCGCCAATGTATGAGCC 441587 Query 76849 ACATGCACGAATATTACTAATAGAT-AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAG 76907 ||||| || | | | | ||||| || || || || | || ||||| | | Sbjct 441586 GGTGGCACGGAT-TCGGTGGACGTTGAGGCCAATACCGCCAGCGGTCTTGGAGATCAAGG 441528 Query 76908 CACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAA 76967 |||| || | |||||| |||||||| || || || || ||| |||||| | || | Sbjct 441527 CACATGTCTTGAGTGTGTCGTAGATGCCGTCAATGCTGTCCTCCTTCATGTCGATGAGGA 441468 Query 76968 AACAGCTAGACATTTGA--TGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025 | ||| |||||| ||| ||||| ||| ||||| || || | || || || || || Sbjct 441467 AGCAGGAAGACATCTGAGGTGATG--GAGTACCTGCGTTGAATAGCGTCGGTGAAGCGTG 441410 Query 77026 AGTGAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCT--ATATCC-C 77081 ||||| | |||| || | |||| | ||| || ||||| | ||||| |||||| | Sbjct 441409 TGTGAAGTACTTTTGTGACATGTAG-TCGTAGGTCTCAATGGC--CTTCTCGATATCCTC 441353 Query 77082 ATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 | | || || || |||||||||||||| | ||| || || || || || Sbjct 441352 ACCG-TGGATACCGACAGCGACACGCATGAGCATGTGTTGTGGGCGCTC 441305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933188011520